RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 RASAL2Q9UJF2 1139 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 ANKARQ7Z5J8 1434 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 TBC1D8O95759 1140 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 MAP2K2P36507 400 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 PARP10Q53GL7 1025 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 NBPF10Q6P3W6 841 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 NSRP1Q9H0G5 558 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 ZBTB1Q9Y2K1 713 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 TSPOAP1O95153 1857 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 NCAPD2Q15021 1401 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 MOCS3O95396 460 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 CTNNA1P35221 906 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 GRIN1Q05586 938 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 CHRNDQ07001 517 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 PDIA6Q15084 440 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 DAAM2Q86T65 1068 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 REXO1Q8N1G1 1221 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 SAMD15Q9P1V8 674 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 CEMIPQ8WUJ3 1361 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 A0A087WUV0 522 aaPredicted RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 OR52Z1P0C646 297 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 CCDC172P0C7W6 258 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 FXR1P51114 621 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 NAA25Q14CX7 972 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 PNMA8AQ86V59 439 aaPredicted RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 MAPKAPK5Q8IW41 473 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
SMARCC2-209ENST00000550164 TTC26A0AVF1 554 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 POLR2FP61218 127 aaKnown RBP11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 MB21D1Q8N884 522 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 P2RX5Q93086 422 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 KRT12Q99456 494 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 EPB41L5Q9HCM4 733 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 FRMPD1Q5SYB0 1578 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 GGCXP38435 758 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 CETN2P41208 172 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 MAGEA9P43362 315 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 ZBED6P86452 979 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 PEX26Q7Z412 305 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 KCNK9Q9NPC2 374 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 DDAH1O94760 285 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 HEXIM1O94992 359 aaKnown RBP11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 NCAPHQ15003 741 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 DDB1Q16531 1140 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 CHP1Q99653 195 aa11.32□□□□□ -0.6
SMARCC2-209ENST00000550164 PRPF3O43395 683 aaKnown RBP11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 EIF4A3P38919 411 aaKnown RBP11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 PRCPP42785 496 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 TRAPPC10P48553 1259 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 EPHB4P54760 987 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 PLS1Q14651 629 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 VWA3BQ502W6 1294 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 TGFBRAP1Q8WUH2 860 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 UTP11Q9Y3A2 253 aaKnown RBP11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 WDR19Q8NEZ3 1342 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 SEMA3EO15041 775 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 N4BP1O75113 896 aaKnown RBP11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 IFT88Q13099 833 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 HLFQ16534 295 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 STXBP4Q6ZWJ1 553 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 SRLQ86TD4 932 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 MTRF1LQ9UGC7 380 aaKnown RBP11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 UTYO14607 1347 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 STK36Q9NRP7 1315 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 KIF20BQ96Q89 1820 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 SGMS1Q86VZ5 419 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 RIN2Q8WYP3 895 aaPredicted RBP11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
SMARCC2-209ENST00000550164 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 MRPL12P52815 198 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 PDCLQ13371 301 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 NR1I3Q14994 352 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 LRRC41Q15345 812 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 HS2ST1Q7LGA3 356 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 MYOCDQ8IZQ8 938 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 DHTKD1Q96HY7 919 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 DPH5Q9H2P9 285 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 EFCC1Q9HA90 598 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 TRIM10Q9UDY6 481 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 BAIAP2L1Q9UHR4 511 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 ADGRL3Q9HAR2 1447 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 DIP2CQ9Y2E4 1556 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 FTCDO95954 541 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 ATP1A1P05023 1023 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms