RNA–Protein interactions for RNA: ENST00000550082.5

NR4A1-213, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5 BASIC

Gene NR4A1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-213ENST00000550082 TMTC3Q6ZXV5 915 aa17.23■□□□□ 0.35
NR4A1-213ENST00000550082 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
NR4A1-213ENST00000550082 KIAA1683Q9H0B3 1180 aa17.23■□□□□ 0.35
NR4A1-213ENST00000550082 GINM1Q9NU53 330 aa17.23■□□□□ 0.35
NR4A1-213ENST00000550082 FRMPD2Q68DX3 1309 aaPredicted RBP17.22■□□□□ 0.35
NR4A1-213ENST00000550082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.22■□□□□ 0.35
NR4A1-213ENST00000550082 CXCL11O14625 94 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 NR1I2O75469 434 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 VCAM1P19320 739 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 GTF2A2P52657 109 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 CAMK4Q16566 473 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 FAM83BQ5T0W9 1011 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 CCDC183Q5T5S1 534 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 DGKHQ86XP1 1220 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 MKL1Q969V6 931 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 VCPKMTQ9H867 229 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 ZKSCAN5Q9Y2L8 839 aa17.22■□□□□ 0.35
NR4A1-213ENST00000550082 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.35
NR4A1-213ENST00000550082 DDAH1O94760 285 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 KAT14Q9H8E8 782 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 FBXO28Q9NVF7 368 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 RCOR1Q9UKL0 485 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 DEXIO95424 95 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 CYP2C8P10632 490 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
NR4A1-213ENST00000550082 NOGQ13253 232 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 TTBK2Q6IQ55 1244 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 RNF214Q8ND24 703 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 BICD2Q8TD16 824 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 CFAP45Q9UL16 551 aa17.21■□□□□ 0.35
NR4A1-213ENST00000550082 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
NR4A1-213ENST00000550082 MMP1P03956 469 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 CETPP11597 493 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 RCAN1P53805 252 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 EARS2Q5JPH6 523 aaKnown RBP17.2■□□□□ 0.34
NR4A1-213ENST00000550082 DIS3L2Q8IYB7 885 aaKnown RBP17.2■□□□□ 0.34
NR4A1-213ENST00000550082 R3HDMLQ9H3Y0 253 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 RPAP3Q9H6T3 665 aaPredicted RBP17.2■□□□□ 0.34
NR4A1-213ENST00000550082 GPCPD1Q9NPB8 672 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 TMOD4Q9NZQ9 345 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 CCDC196A0A1B0GTZ2 297 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 C19orf81C9J6K1 198 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 SLC16A2P36021 539 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 SNAP25P60880 206 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 SH3D19Q5HYK7 790 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 PCDHA7Q9UN72 937 aa17.2■□□□□ 0.34
NR4A1-213ENST00000550082 CENPFP49454 3210 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 PDHXO00330 501 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 TRIM29Q14134 588 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 POTEEQ6S8J3 1075 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 IFNL1Q8IU54 200 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 LINC00301Q8NCQ3 95 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
NR4A1-213ENST00000550082 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 ZNF396Q96N95 335 aaPredicted RBP17.19■□□□□ 0.34
NR4A1-213ENST00000550082 RNF26Q9BY78 433 aaPredicted RBP17.19■□□□□ 0.34
NR4A1-213ENST00000550082 TANGO6Q9C0B7 1094 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 TSKSQ9UJT2 592 aa17.19■□□□□ 0.34
NR4A1-213ENST00000550082 GOLGA6L4A6NEF3 574 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 MANSC4A6NHS7 340 aaPredicted RBP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 CYTH3O43739 400 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 PDHBP11177 359 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 U2AF2P26368 475 aaKnown RBP eCLIP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 MARCKSP29966 332 aaPredicted RBP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 ME1P48163 572 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 TOB1P50616 345 aaPredicted RBP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 GNL2Q13823 731 aaKnown RBP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 BRAPQ7Z569 592 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 UBA5Q9GZZ9 404 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 GOPCQ9HD26 462 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 WNT7AO00755 349 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 PRPF3O43395 683 aaKnown RBP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 SLC1A4P43007 532 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 USP14P54578 494 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 SF3A1Q15459 793 aaKnown RBP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 CCDC96Q2M329 555 aa17.18■□□□□ 0.34
NR4A1-213ENST00000550082 GPKOWQ92917 476 aaPredicted RBP eCLIP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
NR4A1-213ENST00000550082 TESPA1A2RU30 521 aaPredicted RBP17.17■□□□□ 0.34
NR4A1-213ENST00000550082 CALM1P0DP23 149 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 CALM2P0DP24 149 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 CALM3P0DP25 149 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 NPY5RQ15761 445 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 ANO1Q5XXA6 986 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 CCAR1Q8IX12 1150 aaKnown RBP17.17■□□□□ 0.34
NR4A1-213ENST00000550082 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 GMCL1P1Q8NEA9 526 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 P2RX7Q99572 595 aaKnown RBP17.17■□□□□ 0.34
NR4A1-213ENST00000550082 SH2D4AQ9H788 454 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 AGTPBP1Q9UPW5 1226 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
NR4A1-213ENST00000550082 TMEM232C9JQI7 657 aa17.16■□□□□ 0.34
NR4A1-213ENST00000550082 TRPA1O75762 1119 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms