RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 IPO7O95373 1038 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 TSPY3P0CV98 308 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 TSPY8P0CW00 308 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 RPS8P62241 208 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 ASIC1P78348 528 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 WHAMMP3Q1A5X7 153 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 MARCH10Q8NA82 808 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 CCDC148Q8NFR7 591 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 PDE4DQ08499 809 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 TBC1D8BQ0IIM8 1120 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 GPR101Q96P66 508 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 MMS19Q96T76 1030 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 IL17RBQ9NRM6 502 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 L1RE1Q9UN81 338 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
RAPGEF3-219ENST00000549151 ORC4O43929 436 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 TRIM14Q14142 442 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 PSMB7Q99436 277 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 JADE2Q9NQC1 790 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 SRP68Q9UHB9 627 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 LRP5O75197 1615 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 KDM4FA0A1W2PPD8 638 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 LGALS16A8MUM7 142 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 ZNF185O15231 689 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 TBC1D9BQ66K14 1250 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 C4orf32Q8N8J7 132 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 PYM1Q9BRP8 204 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 TUBGCP2Q9BSJ2 902 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 LRRIQ3A6PVS8 624 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 FCER1AP12319 257 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 HERVK_113P62684 666 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 MAPKAPK5Q8IW41 473 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 LRRC15Q8TF66 581 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 TGFBRAP1Q8WUH2 860 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 JAKMIP2Q96AA8 810 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 LACRTQ9GZZ8 138 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 ARPP21Q9UBL0 812 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
RAPGEF3-219ENST00000549151 PLCG1P19174 1290 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 MATR3P43243 847 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 ARL6IP4Q66PJ3 421 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 WDR59Q6PJI9 974 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 KRT26Q7Z3Y9 468 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 NBPF5PQ86XG9 351 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 ZNF444Q8N0Y2 327 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 UIMC1Q96RL1 719 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 PLEKHA4Q9H4M7 779 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 RAB21Q9UL25 225 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 SAR1BQ9Y6B6 198 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 TECP42680 631 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 NAPAP54920 295 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 FKBP15Q5T1M5 1219 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 LEKR1Q6ZMV7 388 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 FBXO33Q7Z6M2 555 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 NLRP3Q96P20 1036 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 ANKIB1Q9P2G1 1089 aa13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-219ENST00000549151 ARAP2Q8WZ64 1704 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 RCCD1A6NED2 376 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 CYTH3O43739 400 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 FGRP09769 529 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 STK4Q13043 487 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 TXNRD1Q16881 649 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 CABP7Q86V35 215 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 NOC4LQ9BVI4 516 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 TCP11L1Q9NUJ3 509 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 EXOC1Q9NV70 894 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 MYH14Q7Z406 1995 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 VGLL3A8MV65 326 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 PCP11498 1178 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 C10orf67Q8IYJ2 551 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 HNRNPLLQ8WVV9 542 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 EXOC4Q96A65 974 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 CNOT6LQ96LI5 555 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 HAUS4Q9H6D7 363 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 SLC39A2Q9NP94 309 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 PLEKP08567 350 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 IDEP14735 1019 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 AMPD2Q01433 879 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 SLC35G1Q2M3R5 365 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 ANKRD40Q6AI12 368 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 FAM207AQ9NSI2 230 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 CACNA1SQ13698 1873 aa13.35□□□□□ -0.27
RAPGEF3-219ENST00000549151 DISP2A7MBM2 1401 aa13.34□□□□□ -0.27
RAPGEF3-219ENST00000549151 BCL9LQ86UU0 1499 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms