RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ACSL6Q9UKU0 697 aa7.06□□□□□ -1.28
CCDC38-206ENST00000548771 SOX9P48436 509 aa7.05□□□□□ -1.28
CCDC38-206ENST00000548771 SLC14A2Q15849 920 aa7.05□□□□□ -1.28
CCDC38-206ENST00000548771 DCAF15Q66K64 600 aa7.05□□□□□ -1.28
CCDC38-206ENST00000548771 CRTC3Q6UUV7 619 aa7.05□□□□□ -1.28
CCDC38-206ENST00000548771 FERD3LQ96RJ6 166 aa7.05□□□□□ -1.28
CCDC38-206ENST00000548771 SLC12A9Q9BXP2 914 aa7.05□□□□□ -1.28
CCDC38-206ENST00000548771 AP5S1Q9NUS5 200 aa7.05□□□□□ -1.28
CCDC38-206ENST00000548771 MBD1Q9UIS9 605 aaPredicted RBP7.05□□□□□ -1.28
CCDC38-206ENST00000548771 ZNF214Q9UL59 606 aaPredicted RBP7.05□□□□□ -1.28
CCDC38-206ENST00000548771 LTBP3Q9NS15 1303 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 A0A1W2PQ45 241 aaPredicted RBP7.04□□□□□ -1.28
CCDC38-206ENST00000548771 A0A1W2PQY0 241 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 FAM86C2PA6NEL3 165 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 WTIPA6NIX2 430 aaPredicted RBP7.04□□□□□ -1.28
CCDC38-206ENST00000548771 MEIS1O00470 390 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 FOXD2O60548 495 aaPredicted RBP7.04□□□□□ -1.28
CCDC38-206ENST00000548771 CD247P20963 164 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 ZNF445P59923 1031 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 PAK2Q13177 524 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 ADGRF1Q5T601 910 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 TDRD10Q5VZ19 366 aaKnown RBP7.04□□□□□ -1.28
CCDC38-206ENST00000548771 GALNT18Q6P9A2 607 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 CCDC144CPQ8IYA2 1237 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 ZNF654Q8IZM8 581 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 SGPP1Q9BX95 441 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 ZCCHC4Q9H5U6 513 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 GP6Q9HCN6 339 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 GINM1Q9NU53 330 aa7.04□□□□□ -1.28
CCDC38-206ENST00000548771 GPR55Q9Y2T6 319 aaPredicted RBP7.04□□□□□ -1.28
CCDC38-206ENST00000548771 KRTAP10-2P60368 255 aa7.03□□□□□ -1.28
CCDC38-206ENST00000548771 KLHL14Q9P2G3 628 aa7.03□□□□□ -1.28
CCDC38-206ENST00000548771 GIPRP48546 466 aa7.02□□□□□ -1.29
CCDC38-206ENST00000548771 SPATA32Q96LK8 384 aa7.02□□□□□ -1.29
CCDC38-206ENST00000548771 JMJD8Q96S16 334 aa7.02□□□□□ -1.29
CCDC38-206ENST00000548771 CNTD2Q9H8S5 307 aa7.02□□□□□ -1.29
CCDC38-206ENST00000548771 ZNF451Q9Y4E5 1061 aa7.02□□□□□ -1.29
CCDC38-206ENST00000548771 FHOD1Q9Y613 1164 aa7.02□□□□□ -1.29
CCDC38-206ENST00000548771 A0A087WZG4 1122 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 H0Y8X5 98 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 CBFA2T2O43439 604 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 SDHBP21912 280 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 VIPR1P32241 457 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 GJA8P48165 433 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 HDLBPQ00341 1268 aaKnown RBP7.01□□□□□ -1.29
CCDC38-206ENST00000548771 LAPTM5Q13571 262 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
CCDC38-206ENST00000548771 CDADC1Q9BWV3 514 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 TNFRSF12AQ9NP84 129 aa7.01□□□□□ -1.29
CCDC38-206ENST00000548771 FGF10O15520 208 aaPredicted RBP7□□□□□ -1.29
CCDC38-206ENST00000548771 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
CCDC38-206ENST00000548771 TMEM132EQ6IEE7 984 aa7□□□□□ -1.29
CCDC38-206ENST00000548771 FCRL3Q96P31 734 aaPredicted RBP7□□□□□ -1.29
CCDC38-206ENST00000548771 DSCC1Q9BVC3 393 aa7□□□□□ -1.29
CCDC38-206ENST00000548771 EPB41L4AQ9HCS5 686 aaPredicted RBP7□□□□□ -1.29
CCDC38-206ENST00000548771 KIAA1522Q9P206 1035 aaPredicted RBP7□□□□□ -1.29
CCDC38-206ENST00000548771 EFR3BQ9Y2G0 817 aa7□□□□□ -1.29
CCDC38-206ENST00000548771 ABLIM1O14639 778 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 TP53P04637 393 aaPredicted RBP6.99□□□□□ -1.29
CCDC38-206ENST00000548771 PRKCAP17252 672 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 MVKQ03426 396 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 SSPNQ14714 243 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 FBXW10Q5XX13 1052 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 CCDC81Q6ZN84 652 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 C19orf47Q8N9M1 422 aaKnown RBP6.99□□□□□ -1.29
CCDC38-206ENST00000548771 BRF1Q92994 677 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 KCTD3Q9Y597 815 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 TAF6LQ9Y6J9 622 aa6.99□□□□□ -1.29
CCDC38-206ENST00000548771 A0A1W2PQH9 124 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 IRS4O14654 1257 aaPredicted RBP6.98□□□□□ -1.29
CCDC38-206ENST00000548771 N4BP3O15049 544 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 MPOP05164 745 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 GSTM1P09488 218 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 MSL3P1P0C860 447 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 EPHB3P54753 998 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 CYP4F8P98187 520 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 NT5DC4Q86YG4 428 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 NLGN2Q8NFZ4 835 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 SHDQ96IW2 340 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 KCNC2Q96PR1 638 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 CNOT6Q9ULM6 557 aaKnown RBP6.98□□□□□ -1.29
CCDC38-206ENST00000548771 IRS2Q9Y4H2 1338 aa6.98□□□□□ -1.29
CCDC38-206ENST00000548771 UNCXA6NJT0 531 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 TRIM13O60858 407 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 NOP2P46087 812 aaKnown RBP6.97□□□□□ -1.29
CCDC38-206ENST00000548771 CDR1P51861 262 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 NOL9Q5SY16 702 aaKnown RBP6.97□□□□□ -1.29
CCDC38-206ENST00000548771 HLA-DQA1Q5Y7H0 255 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 GGNQ86UU5 652 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 TMEFF1Q8IYR6 380 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 FIBCD1Q8N539 461 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 PANK1Q8TE04 598 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 DACT3Q96B18 629 aaPredicted RBP6.97□□□□□ -1.29
CCDC38-206ENST00000548771 GPRASP2Q96D09 838 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 MRRFQ96E11 262 aaKnown RBP6.97□□□□□ -1.29
CCDC38-206ENST00000548771 SIGLEC10Q96LC7 697 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 KLHL25Q9H0H3 589 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 SIRT5Q9NXA8 310 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 IMPACTQ9P2X3 320 aa6.97□□□□□ -1.29
CCDC38-206ENST00000548771 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms