RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
CDK4-205ENST00000547853 CNPY2Q9Y2B0 182 aa11.36□□□□□ -0.59
CDK4-205ENST00000547853 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
CDK4-205ENST00000547853 IVNS1ABPQ9Y6Y0 642 aa11.36□□□□□ -0.59
CDK4-205ENST00000547853 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
CDK4-205ENST00000547853 PQBP1O60828 265 aaKnown RBP11.35□□□□□ -0.59
CDK4-205ENST00000547853 MYCNP04198 464 aaPredicted RBP11.35□□□□□ -0.59
CDK4-205ENST00000547853 RAG1P15918 1043 aa11.35□□□□□ -0.59
CDK4-205ENST00000547853 VCAM1P19320 739 aa11.35□□□□□ -0.59
CDK4-205ENST00000547853 ADORA2AP29274 412 aa11.35□□□□□ -0.59
CDK4-205ENST00000547853 IL15P40933 162 aaPredicted RBP11.35□□□□□ -0.59
CDK4-205ENST00000547853 CWC27Q6UX04 472 aaKnown RBP11.35□□□□□ -0.59
CDK4-205ENST00000547853 MAP4K1Q92918 833 aa11.35□□□□□ -0.59
CDK4-205ENST00000547853 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDK4-205ENST00000547853 LRFN3Q9BTN0 628 aa11.35□□□□□ -0.59
CDK4-205ENST00000547853 DHX36Q9H2U1 1008 aaKnown RBP11.35□□□□□ -0.59
CDK4-205ENST00000547853 FAM13BQ9NYF5 915 aa11.35□□□□□ -0.59
CDK4-205ENST00000547853 CXXC1Q9P0U4 656 aaPredicted RBP11.35□□□□□ -0.59
CDK4-205ENST00000547853 A0A1W2PQ45 241 aaPredicted RBP11.34□□□□□ -0.59
CDK4-205ENST00000547853 A0A1W2PQY0 241 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 GRXCR1A8MXD5 290 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L15C9J2P7 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L13C9JLJ4 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L11C9JVI0 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L18D6R9N7 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L22D6RA61 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L17D6RBQ6 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L19D6RCP7 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L20D6RJB6 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 FIBPO43427 364 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 BMP1P13497 986 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 GSTO1P78417 241 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 USP17L24Q0WX57 530 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 G3BP1Q13283 466 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDK4-205ENST00000547853 SYCP1Q15431 976 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 CCDC85BQ15834 202 aaPredicted RBP11.34□□□□□ -0.59
CDK4-205ENST00000547853 ZYXQ15942 572 aaKnown RBP11.34□□□□□ -0.59
CDK4-205ENST00000547853 CATSPERGQ6ZRH7 1159 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 NUP62CLQ9H1M0 184 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 TBX21Q9UL17 535 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 PA2G4Q9UQ80 394 aaKnown RBP11.34□□□□□ -0.59
CDK4-205ENST00000547853 KIF3AQ9Y496 699 aa11.34□□□□□ -0.59
CDK4-205ENST00000547853 WDFY4Q6ZS81 3184 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 GH2P01242 217 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 KCNQ1P51787 676 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 TFF2Q03403 129 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 FAAP100Q0VG06 881 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 DHX8Q14562 1220 aaKnown RBP11.33□□□□□ -0.6
CDK4-205ENST00000547853 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 ATL3Q6DD88 541 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 BLOC1S2Q6QNY1 142 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 ANKRD33Q7Z3H0 272 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 CCDC83Q8IWF9 413 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 FEZ1Q99689 392 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 CCDC94Q9BW85 323 aaPredicted RBP11.33□□□□□ -0.6
CDK4-205ENST00000547853 IL25Q9H293 177 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 C11orf16Q9NQ32 467 aa11.33□□□□□ -0.6
CDK4-205ENST00000547853 RBM8AQ9Y5S9 174 aaKnown RBP11.33□□□□□ -0.6
CDK4-205ENST00000547853 GOLGA6L4A6NEF3 574 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 CTAGE5O15320 804 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 NEMFO60524 1076 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 COBLO75128 1261 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 LDHCP07864 332 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 PRAMEF19Q5SWL8 479 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
CDK4-205ENST00000547853 RBM43Q6ZSC3 357 aaKnown RBP11.32□□□□□ -0.6
CDK4-205ENST00000547853 C16orf59Q7L2K0 433 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 ADGRA1Q86SQ6 560 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 DPP9Q86TI2 863 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 MAPKAPK5Q8IW41 473 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 CRACR2BQ8N4Y2 399 aaPredicted RBP11.32□□□□□ -0.6
CDK4-205ENST00000547853 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 KIAA1524Q8TCG1 905 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 PKNOX2Q96KN3 472 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 MOV10L1Q9BXT6 1211 aaKnown RBP11.32□□□□□ -0.6
CDK4-205ENST00000547853 ZMYND15Q9H091 742 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 ZSCAN16Q9H4T2 348 aaPredicted RBP11.32□□□□□ -0.6
CDK4-205ENST00000547853 EPHX3Q9H6B9 360 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 XPNPEP3Q9NQH7 507 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 TMEM39AQ9NV64 488 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.32□□□□□ -0.6
CDK4-205ENST00000547853 ZNF318Q5VUA4 2279 aa11.32□□□□□ -0.6
CDK4-205ENST00000547853 CACNA1AO00555 2505 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 VPS37CA5D8V6 355 aaPredicted RBP11.31□□□□□ -0.6
CDK4-205ENST00000547853 PGK1P00558 417 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 HMGB1P09429 215 aaKnown RBP11.31□□□□□ -0.6
CDK4-205ENST00000547853 RPS6KB1P23443 525 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
CDK4-205ENST00000547853 CDC25BP30305 580 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 TIMM10P62072 90 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 DNM1Q05193 864 aaKnown RBP11.31□□□□□ -0.6
CDK4-205ENST00000547853 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 AACSQ86V21 672 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 SLC44A5Q8NCS7 719 aa11.31□□□□□ -0.6
CDK4-205ENST00000547853 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms