RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 GOLGA6AQ9NYA3 693 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
HOXC11-202ENST00000546378 SAP30BPQ9UHR5 308 aaKnown RBP16.43■□□□□ 0.22
HOXC11-202ENST00000546378 SLC5A1P13866 664 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 APBA1Q02410 837 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 HLTFQ14527 1009 aaKnown RBP eCLIP16.42■□□□□ 0.22
HOXC11-202ENST00000546378 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 CSGALNACT2Q8N6G5 542 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 NDUFA10O95299 355 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 GNGT1P63211 74 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 BRD3Q15059 726 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 CYP26C1Q6V0L0 522 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 ADAT2Q7Z6V5 191 aaKnown RBP16.42■□□□□ 0.22
HOXC11-202ENST00000546378 SLC51AQ86UW1 340 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 ACBD3Q9H3P7 528 aa16.42■□□□□ 0.22
HOXC11-202ENST00000546378 FRMD3A2A2Y4 597 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-202ENST00000546378 NFRKBQ6P4R8 1299 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 LRRC31Q6UY01 552 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 IQCA1Q86XH1 822 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 RCCD1A6NED2 376 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 PARP1P09874 1014 aaKnown RBP16.41■□□□□ 0.22
HOXC11-202ENST00000546378 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-202ENST00000546378 MDM2Q00987 491 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-202ENST00000546378 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-202ENST00000546378 MAATS1Q7Z4T9 603 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 KLHL7Q8IXQ5 586 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 IQUBQ8NA54 791 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 CCDC42Q96M95 316 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 TRIM31Q9BZY9 425 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 COL22A1Q8NFW1 1626 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-202ENST00000546378 A0A1B0GTH6 734 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 CCDC194A0A1B0GVG4 234 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 GOLGA6BA6NDN3 693 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 APBA3O96018 575 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 ZNF18P17022 549 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 IFNAR1P17181 557 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 ESR2Q92731 530 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 EXOC4Q96A65 974 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 KRT23Q9C075 422 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 L1RE1Q9UN81 338 aa16.41■□□□□ 0.22
HOXC11-202ENST00000546378 SRPRBQ9Y5M8 271 aaKnown RBP16.41■□□□□ 0.22
HOXC11-202ENST00000546378 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
HOXC11-202ENST00000546378 RIPOR2Q9Y4F9 1068 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 NTSR2O95665 410 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 KRT14P02533 472 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 FCER1AP12319 257 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 SPA17Q15506 151 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
HOXC11-202ENST00000546378 TBX2Q13207 712 aaPredicted RBP16.39■□□□□ 0.21
HOXC11-202ENST00000546378 ENAHQ8N8S7 591 aaPredicted RBP16.39■□□□□ 0.21
HOXC11-202ENST00000546378 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 ODF2Q5BJF6 829 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 COG1Q8WTW3 980 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 SHISA4Q96DD7 197 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 DMGDHQ9UI17 866 aaKnown RBP16.39■□□□□ 0.21
HOXC11-202ENST00000546378 ITGB4P16144 1822 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 PPP1R3GB7ZBB8 358 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 PDE2AO00408 941 aaPredicted RBP16.39■□□□□ 0.21
HOXC11-202ENST00000546378 RPN1P04843 607 aaKnown RBP16.39■□□□□ 0.21
HOXC11-202ENST00000546378 PDE4DQ08499 809 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 FAM76AQ8TAV0 307 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
HOXC11-202ENST00000546378 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
HOXC11-202ENST00000546378 FTCDO95954 541 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 TMTC1Q8IUR5 882 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 UHMK1Q8TAS1 419 aaKnown RBP16.38■□□□□ 0.21
HOXC11-202ENST00000546378 SELENOOQ9BVL4 669 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 NARFQ9UHQ1 456 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 TTF2Q9UNY4 1162 aaKnown RBP16.38■□□□□ 0.21
HOXC11-202ENST00000546378 JRKLQ9Y4A0 524 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 XDHP47989 1333 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 CDHR2Q9BYE9 1310 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 CIAO1O76071 339 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 KIF5AQ12840 1032 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 TCP11X2Q5H9J9 407 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 ANKRD18AQ8IVF6 992 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 OR8K1Q8NGG5 319 aa16.38■□□□□ 0.21
HOXC11-202ENST00000546378 CELF1Q92879 486 aaKnown RBP16.38■□□□□ 0.21
HOXC11-202ENST00000546378 PPANQ9NQ55 473 aaKnown RBP16.38■□□□□ 0.21
HOXC11-202ENST00000546378 NDUFAB1O14561 156 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 TECP42680 631 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 TXKP42681 527 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 PUM3Q15397 648 aaKnown RBP16.37■□□□□ 0.21
HOXC11-202ENST00000546378 NELFCDQ8IXH7 590 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 RASSF7Q02833 373 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 CCDC70Q6NSX1 233 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 KANK3Q6NY19 840 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms