RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PPP1R12BO60237 982 aaPredicted RBP22.25■■□□□ 1.15
SKP2-208ENST00000546211 PRKG1Q13976 671 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 KRT25Q7Z3Z0 450 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.25■■□□□ 1.15
SKP2-208ENST00000546211 RASGRP4Q8TDF6 673 aa22.25■■□□□ 1.15
SKP2-208ENST00000546211 USP2O75604 605 aaPredicted RBP22.24■■□□□ 1.15
SKP2-208ENST00000546211 BMP15O95972 392 aa22.24■■□□□ 1.15
SKP2-208ENST00000546211 NF2P35240 595 aa22.24■■□□□ 1.15
SKP2-208ENST00000546211 ZSCAN23Q3MJ62 389 aa22.24■■□□□ 1.15
SKP2-208ENST00000546211 NOM1Q5C9Z4 860 aaKnown RBP22.24■■□□□ 1.15
SKP2-208ENST00000546211 TTC38Q5R3I4 469 aa22.24■■□□□ 1.15
SKP2-208ENST00000546211 FBXO11Q86XK2 927 aa22.24■■□□□ 1.15
SKP2-208ENST00000546211 REXO1Q8N1G1 1221 aaKnown RBP22.24■■□□□ 1.15
SKP2-208ENST00000546211 AMNQ9BXJ7 453 aa22.24■■□□□ 1.15
SKP2-208ENST00000546211 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.24■■□□□ 1.15
SKP2-208ENST00000546211 PCDHA1Q9Y5I3 950 aa22.24■■□□□ 1.15
SKP2-208ENST00000546211 WDR90Q96KV7 1748 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 POLR2AP24928 1970 aaKnown RBP22.23■■□□□ 1.15
SKP2-208ENST00000546211 A0A1W2PQ27 194 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 A0A1W2PQ64 194 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 A0A1W2PQD8 194 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 MARCKSP29966 332 aaPredicted RBP22.23■■□□□ 1.15
SKP2-208ENST00000546211 TRAF1Q13077 416 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 MTMR2Q13614 643 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 CCDC183Q5T5S1 534 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 CCAR1Q8IX12 1150 aaKnown RBP22.23■■□□□ 1.15
SKP2-208ENST00000546211 ZNF280CQ8ND82 737 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 CUL5Q93034 780 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 GLT8D2Q9H1C3 349 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 RIC8AQ9NPQ8 531 aa22.23■■□□□ 1.15
SKP2-208ENST00000546211 LIG1P18858 919 aa22.22■■□□□ 1.15
SKP2-208ENST00000546211 MRPL12P52815 198 aaKnown RBP22.22■■□□□ 1.15
SKP2-208ENST00000546211 SPP2Q13103 211 aa22.22■■□□□ 1.15
SKP2-208ENST00000546211 DLK2Q6UY11 383 aa22.22■■□□□ 1.15
SKP2-208ENST00000546211 CCDC73Q6ZRK6 1079 aa22.22■■□□□ 1.15
SKP2-208ENST00000546211 KIFC2Q96AC6 838 aa22.22■■□□□ 1.15
SKP2-208ENST00000546211 CDCA5Q96FF9 252 aa22.22■■□□□ 1.15
SKP2-208ENST00000546211 POTECB2RU33 542 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 IREB2P48200 963 aaKnown RBP22.21■■□□□ 1.15
SKP2-208ENST00000546211 BACE1P56817 501 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 MAP3K9P80192 1104 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 NONOQ15233 471 aaKnown RBP eCLIP22.21■■□□□ 1.15
SKP2-208ENST00000546211 MRPS27Q92552 414 aaKnown RBP22.21■■□□□ 1.15
SKP2-208ENST00000546211 ZHX2Q9Y6X8 837 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 CUTAO60888 179 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 SNAP25P60880 206 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 KRI1Q8N9T8 703 aaKnown RBP22.21■■□□□ 1.15
SKP2-208ENST00000546211 FSIP1Q8NA03 581 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 PSTPIP2Q9H939 334 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 DDX19AQ9NUU7 478 aaKnown RBP22.21■■□□□ 1.15
SKP2-208ENST00000546211 BIN2Q9UBW5 565 aaPredicted RBP22.21■■□□□ 1.15
SKP2-208ENST00000546211 CSADQ9Y600 493 aa22.21■■□□□ 1.15
SKP2-208ENST00000546211 MORC2Q9Y6X9 1032 aaPredicted RBP22.21■■□□□ 1.15
SKP2-208ENST00000546211 ZNF174Q15697 407 aa22.2■■□□□ 1.14
SKP2-208ENST00000546211 AXDND1Q5T1B0 1012 aaPredicted RBP22.2■■□□□ 1.14
SKP2-208ENST00000546211 RANBP17Q9H2T7 1088 aaKnown RBP22.2■■□□□ 1.14
SKP2-208ENST00000546211 DACT1Q9NYF0 836 aa22.2■■□□□ 1.14
SKP2-208ENST00000546211 SRCAPQ6ZRS2 3230 aa22.2■■□□□ 1.14
SKP2-208ENST00000546211 C19orf81C9J6K1 198 aa22.19■■□□□ 1.14
SKP2-208ENST00000546211 LETM1O95202 739 aaPredicted RBP22.19■■□□□ 1.14
SKP2-208ENST00000546211 INF2Q27J81 1249 aa22.19■■□□□ 1.14
SKP2-208ENST00000546211 USH1GQ495M9 461 aa22.19■■□□□ 1.14
SKP2-208ENST00000546211 JAKMIP3Q5VZ66 844 aa22.19■■□□□ 1.14
SKP2-208ENST00000546211 EMILIN3Q9NT22 766 aa22.19■■□□□ 1.14
SKP2-208ENST00000546211 CLEC11AQ9Y240 323 aa22.19■■□□□ 1.14
SKP2-208ENST00000546211 VCAM1P19320 739 aa22.18■■□□□ 1.14
SKP2-208ENST00000546211 CMA1P23946 247 aa22.18■■□□□ 1.14
SKP2-208ENST00000546211 VGLL4Q14135 290 aa22.18■■□□□ 1.14
SKP2-208ENST00000546211 SAMD1Q6SPF0 538 aaPredicted RBP22.18■■□□□ 1.14
SKP2-208ENST00000546211 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.18■■□□□ 1.14
SKP2-208ENST00000546211 PRPF38AQ8NAV1 312 aaKnown RBP22.18■■□□□ 1.14
SKP2-208ENST00000546211 SLF1Q9BQI6 1058 aa22.18■■□□□ 1.14
SKP2-208ENST00000546211 TANGO6Q9C0B7 1094 aa22.18■■□□□ 1.14
SKP2-208ENST00000546211 GOLPH3LQ9H4A5 285 aa22.18■■□□□ 1.14
SKP2-208ENST00000546211 FBXO28Q9NVF7 368 aa22.18■■□□□ 1.14
SKP2-208ENST00000546211 NR1I2O75469 434 aa22.17■■□□□ 1.14
SKP2-208ENST00000546211 PTPREP23469 700 aa22.17■■□□□ 1.14
SKP2-208ENST00000546211 ZNF445P59923 1031 aa22.17■■□□□ 1.14
SKP2-208ENST00000546211 FAM160A1Q05DH4 1040 aa22.17■■□□□ 1.14
SKP2-208ENST00000546211 TMEM260Q9NX78 707 aa22.17■■□□□ 1.14
SKP2-208ENST00000546211 FBXO2Q9UK22 296 aaPredicted RBP22.17■■□□□ 1.14
SKP2-208ENST00000546211 SNCAIPQ9Y6H5 919 aa22.17■■□□□ 1.14
SKP2-208ENST00000546211 DCAF8L1A6NGE4 600 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 WNT7AO00755 349 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 MCM7P33993 719 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 CLK2P49760 499 aaKnown RBP22.16■■□□□ 1.14
SKP2-208ENST00000546211 DGKZQ13574 1117 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 TTLL12Q14166 644 aaPredicted RBP22.16■■□□□ 1.14
SKP2-208ENST00000546211 CCDC174Q6PII3 467 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 NEK8Q86SG6 692 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 C12orf42Q96LP6 360 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 NUP62CLQ9H1M0 184 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 RPAP3Q9H6T3 665 aaPredicted RBP22.16■■□□□ 1.14
SKP2-208ENST00000546211 SRPRBQ9Y5M8 271 aaKnown RBP22.16■■□□□ 1.14
SKP2-208ENST00000546211 A0A1B0GVL5 298 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 SYCE3A1L190 88 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 ATP2C1P98194 919 aaPredicted RBP22.16■■□□□ 1.14
SKP2-208ENST00000546211 PTGDRQ13258 359 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 UBE2SQ16763 222 aa22.16■■□□□ 1.14
SKP2-208ENST00000546211 MCTP2Q6DN12 878 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms