RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	ANKIB1	Q9P2G1	1089 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	RPL26L1	Q9UNX3	145 aa	Known RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	C15orf41	Q9Y2V0	281 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	SAMM50	Q9Y512	469 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	ATP8B3	O60423	1300 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	PDS5A	Q29RF7	1337 aa	Known RBP	11.29	□□□□□ -0.6
UBC-213	ENST00000546120	PRR36	Q9H6K5	1346 aa		11.29	□□□□□ -0.6
UBC-213	ENST00000546120	DISP2	A7MBM2	1401 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	PPIP5K2	O43314	1243 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	ATP6V1G2	O95670	118 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	SRGN	P10124	158 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	ALAD	P13716	330 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	GBP1	P32455	592 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	KIF5B	P33176	963 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	TBC1D8B	Q0IIM8	1120 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	TFCP2	Q12800	502 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	MAP3K12	Q12852	859 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	DYNC1I2	Q13409	638 aa	Known RBP	11.28	□□□□□ -0.6
UBC-213	ENST00000546120	COBLL1	Q53SF7	1204 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	C10orf76	Q5T2E6	689 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.28	□□□□□ -0.6
UBC-213	ENST00000546120	APOA5	Q6Q788	366 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	STK11IP	Q8N1F8	1099 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	CCDC197	Q8NCU1	140 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	RASSF8	Q8NHQ8	419 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.28	□□□□□ -0.6
UBC-213	ENST00000546120	CNKSR2	Q8WXI2	1034 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.28	□□□□□ -0.6
UBC-213	ENST00000546120	RNPC3	Q96LT9	517 aa	Known RBP	11.28	□□□□□ -0.6
UBC-213	ENST00000546120	NOX5	Q96PH1	765 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	CENPH	Q9H3R5	247 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	PLEKHA4	Q9H4M7	779 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.28	□□□□□ -0.6
UBC-213	ENST00000546120	TLR7	Q9NYK1	1049 aa	Known RBP	11.28	□□□□□ -0.6
UBC-213	ENST00000546120	TPX2	Q9ULW0	747 aa	Known RBP	11.28	□□□□□ -0.6
UBC-213	ENST00000546120	MAST3	O60307	1309 aa		11.28	□□□□□ -0.6
UBC-213	ENST00000546120	SSU72P8	A0A1W2PR75	194 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	CCT8L1P	A6NM43	557 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	STXBP3	O00186	592 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	PSMA7	O14818	248 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	VIM	P08670	466 aa	Known RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	IFIT1	P09914	478 aa	Known RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	PAX7	P23759	505 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	CNGA1	P29973	690 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	MRPS35	P82673	323 aa	Known RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	ROR2	Q01974	943 aa	Known RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	C1orf141	Q5JVX7	400 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	CPLX4	Q7Z7G2	160 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	SESTD1	Q86VW0	696 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	ZNF507	Q8TCN5	953 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	SH3TC2	Q8TF17	1288 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	RIN2	Q8WYP3	895 aa	Predicted RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	CCT6B	Q92526	530 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	SYN2	Q92777	582 aa	Predicted RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	CNKSR1	Q969H4	720 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	AIDA	Q96BJ3	306 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	TBC1D31	Q96DN5	1066 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	SPDL1	Q96EA4	605 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	SEC16B	Q96JE7	1060 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	ERGIC2	Q96RQ1	377 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	LRRC1	Q9BTT6	524 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	KRT23	Q9C075	422 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	CCDC134	Q9H6E4	229 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	NOD2	Q9HC29	1040 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	TRPC6	Q9Y210	931 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	REXO2	Q9Y3B8	237 aa	Known RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	NWD1	Q149M9	1564 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	SOS2	Q07890	1332 aa	Predicted RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.27	□□□□□ -0.61
UBC-213	ENST00000546120	LTBP4	Q8N2S1	1624 aa		11.27	□□□□□ -0.61
UBC-213	ENST00000546120	MPHOSPH10	O00566	681 aa	Known RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	SART1	O43290	800 aa	Known RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	ORC4	O43929	436 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	ATP5H	O75947	161 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	TRIM37	O94972	964 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	ANXA13	P27216	316 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	SKIV2L2	P42285	1042 aa	Known RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	GCLC	P48506	637 aa	Predicted RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	FOSB	P53539	338 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	HERVK_113	P62684	666 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	PPP2R2A	P63151	447 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	ELF3	P78545	371 aa	Predicted RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	COL9A3	Q14050	684 aa	Predicted RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	LBR	Q14739	615 aa	Known RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	NTRK3	Q16288	839 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	SLC5A9	Q2M3M2	681 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	FKBP15	Q5T1M5	1219 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	SLC30A9	Q6PML9	568 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	TXNDC2	Q86VQ3	553 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	HOOK3	Q86VS8	718 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	CCDC63	Q8NA47	563 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	LMBR1	Q8WVP7	490 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	IP6K1	Q92551	441 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	ARL8A	Q96BM9	186 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	BICD1	Q96G01	975 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	SCLT1	Q96NL6	688 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	MED15	Q96RN5	788 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	CCDC28B	Q9BUN5	200 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	FAM129A	Q9BZQ8	928 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms