RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SYDE2Q5VT97 1194 aa13.85□□□□□ -0.19
HDAC4-216ENST00000544989 TINF2Q9BSI4 451 aa13.85□□□□□ -0.19
HDAC4-216ENST00000544989 DDX20Q9UHI6 824 aaKnown RBP13.85□□□□□ -0.19
HDAC4-216ENST00000544989 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
HDAC4-216ENST00000544989 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
HDAC4-216ENST00000544989 CNPY2Q9Y2B0 182 aa13.85□□□□□ -0.19
HDAC4-216ENST00000544989 NR2E3Q9Y5X4 410 aa13.85□□□□□ -0.19
HDAC4-216ENST00000544989 SYNGAP1Q96PV0 1343 aa13.85□□□□□ -0.19
HDAC4-216ENST00000544989 ERICH2A1L162 156 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 SEPT4O43236 478 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 ICAM1P05362 532 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 CCND3P30281 292 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-216ENST00000544989 ZNF543Q08ER8 600 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 ERICH6BQ5W0A0 696 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 LHX8Q68G74 356 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 RALYLQ86SE5 291 aaKnown RBP13.84□□□□□ -0.19
HDAC4-216ENST00000544989 PNMA1Q8ND90 353 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 DPF3Q92784 378 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 MAP4K1Q92918 833 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 IL25Q9H293 177 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 RANBP17Q9H2T7 1088 aaKnown RBP13.84□□□□□ -0.19
HDAC4-216ENST00000544989 ZSWIM5Q9P217 1185 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 RIPK3Q9Y572 518 aa13.84□□□□□ -0.19
HDAC4-216ENST00000544989 DNAJC25-GNG10A0A024R161 153 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 PGK2P07205 417 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 SLC4A3P48751 1232 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 PTH1RQ03431 593 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 ASPRV1Q53RT3 343 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 IFIT1BQ5T764 474 aaKnown RBP13.83□□□□□ -0.2
HDAC4-216ENST00000544989 MAMDC4Q6UXC1 1216 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 ENAHQ8N8S7 591 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-216ENST00000544989 ARRDC4Q8NCT1 418 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 NCOA7Q8NI08 942 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 PAWRQ96IZ0 340 aaKnown RBP13.83□□□□□ -0.2
HDAC4-216ENST00000544989 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 MAF1Q9H063 256 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 C11orf49Q9H6J7 331 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 RNF146Q9NTX7 359 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 CCPG1Q9ULG6 757 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 TNKSO95271 1327 aa13.83□□□□□ -0.2
HDAC4-216ENST00000544989 ZNFX1Q9P2E3 1918 aaKnown RBP13.82□□□□□ -0.2
HDAC4-216ENST00000544989 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-216ENST00000544989 CYP21A2P08686 494 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 ALAS1P13196 640 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 CCDC174Q6PII3 467 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 AGBL1Q96MI9 1066 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 ESYT1Q9BSJ8 1104 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 MTA3Q9BTC8 594 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 PRO3102Q9H379 93 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 HOMER2Q9NSB8 354 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 ZNF536O15090 1300 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 WDR19Q8NEZ3 1342 aa13.82□□□□□ -0.2
HDAC4-216ENST00000544989 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
HDAC4-216ENST00000544989 ASB14A6NK59 587 aa13.81□□□□□ -0.2
HDAC4-216ENST00000544989 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
HDAC4-216ENST00000544989 DNM1LO00429 736 aa13.81□□□□□ -0.2
HDAC4-216ENST00000544989 EVI5O60447 810 aa13.81□□□□□ -0.2
HDAC4-216ENST00000544989 PARP1P09874 1014 aaKnown RBP13.81□□□□□ -0.2
HDAC4-216ENST00000544989 RARBP10826 455 aa13.81□□□□□ -0.2
HDAC4-216ENST00000544989 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
HDAC4-216ENST00000544989 RBM8AQ9Y5S9 174 aaKnown RBP13.81□□□□□ -0.2
HDAC4-216ENST00000544989 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-216ENST00000544989 KBTBD13C9JR72 458 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 E7EWF7 191 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 CDC45O75419 566 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 AKR1A1P14550 325 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 SLC16A2P36021 539 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 TTBK2Q6IQ55 1244 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 TRPV1Q8NER1 839 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 MPHOSPH6Q99547 160 aaKnown RBP13.8□□□□□ -0.2
HDAC4-216ENST00000544989 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
HDAC4-216ENST00000544989 A1CFQ9NQ94 594 aaKnown RBP13.8□□□□□ -0.2
HDAC4-216ENST00000544989 PLXNA1Q9UIW2 1896 aa13.79□□□□□ -0.2
HDAC4-216ENST00000544989 IFIT3O14879 490 aaKnown RBP13.79□□□□□ -0.2
HDAC4-216ENST00000544989 MNX1P50219 401 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-216ENST00000544989 TRAF1Q13077 416 aa13.79□□□□□ -0.2
HDAC4-216ENST00000544989 SEC23AQ15436 765 aa13.79□□□□□ -0.2
HDAC4-216ENST00000544989 RASGRP2Q7LDG7 609 aa13.79□□□□□ -0.2
HDAC4-216ENST00000544989 TMTC2Q8N394 836 aa13.79□□□□□ -0.2
HDAC4-216ENST00000544989 FAM133AQ8N9E0 248 aa13.79□□□□□ -0.2
HDAC4-216ENST00000544989 DIS3LQ8TF46 1054 aaKnown RBP13.79□□□□□ -0.2
HDAC4-216ENST00000544989 LSG1Q9H089 658 aaKnown RBP13.79□□□□□ -0.2
HDAC4-216ENST00000544989 ANO2Q9NQ90 1003 aa13.79□□□□□ -0.2
HDAC4-216ENST00000544989 ADD3Q9UEY8 706 aaKnown RBP13.79□□□□□ -0.2
HDAC4-216ENST00000544989 FAM184BQ9ULE4 1060 aa13.79□□□□□ -0.2
HDAC4-216ENST00000544989 VCANP13611 3396 aa13.78□□□□□ -0.2
HDAC4-216ENST00000544989 B4DLN1 442 aa13.78□□□□□ -0.2
HDAC4-216ENST00000544989 H0YGN5 161 aa13.78□□□□□ -0.2
HDAC4-216ENST00000544989 ZNF865P0CJ78 1059 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-216ENST00000544989 COL6A1P12109 1028 aa13.78□□□□□ -0.2
HDAC4-216ENST00000544989 MRPL12P52815 198 aaKnown RBP13.78□□□□□ -0.2
HDAC4-216ENST00000544989 WTAPQ15007 396 aa13.78□□□□□ -0.2
HDAC4-216ENST00000544989 ARMCX2Q7L311 632 aa13.78□□□□□ -0.2
HDAC4-216ENST00000544989 RNF180Q86T96 592 aa13.78□□□□□ -0.2
HDAC4-216ENST00000544989 RGS22Q8NE09 1264 aa13.78□□□□□ -0.2
HDAC4-216ENST00000544989 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms