RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 DIS3L2Q8IYB7 885 aaKnown RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 ANKRD13AQ8IZ07 590 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 WNK4Q96J92 1243 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 P2RX7Q99572 595 aaKnown RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 FTOQ9C0B1 505 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 SH2D4AQ9H788 454 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 ELP3Q9H9T3 547 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 PICK1Q9NRD5 415 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 RBM27Q9P2N5 1060 aaKnown RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 TRPM7Q96QT4 1865 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 PNMA6FA0A0J9YX94 578 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 ESYT2A0FGR8 921 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 ESPNB1AK53 854 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 ZBTB5O15062 677 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 WDR46O15213 610 aaKnown RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 EDIL3O43854 480 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 IREB2P48200 963 aaKnown RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 TOB1P50616 345 aaPredicted RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 DNM1Q05193 864 aaKnown RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 CDC37Q16543 378 aaPredicted RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 DAGLBQ8NCG7 672 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 REPS2Q8NFH8 660 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 WASF1Q92558 559 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 RRP36Q96EU6 259 aaKnown RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 FEZ1Q99689 392 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 RANBP17Q9H2T7 1088 aaKnown RBP8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 VAT1LQ9HCJ6 419 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 SH3GLB2Q9NR46 395 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 CFAP45Q9UL16 551 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 ADAMTS5Q9UNA0 930 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 CLEC11AQ9Y240 323 aa8.05□□□□□ -1.12
HMGCS2-204ENST00000544913 A0A0G2JLL6 359 aaPredicted RBP8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 SYCE3A1L190 88 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 H3BQV1 296 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 PPATQ06203 517 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 FOXD4L6Q3SYB3 417 aaPredicted RBP8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 TREML2Q5T2D2 321 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 IFFO2Q5TF58 517 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 FOXD4L3Q6VB84 417 aaPredicted RBP8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 HEATR3Q7Z4Q2 680 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 PRRT2Q7Z6L0 340 aaPredicted RBP8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 ERO1BQ86YB8 467 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 COA7Q96BR5 231 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 OTUD5Q96G74 571 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 PDLIM2Q96JY6 352 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 ZMYND12Q9H0C1 365 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 FOXP1Q9H334 677 aaPredicted RBP8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 RPAP3Q9H6T3 665 aaPredicted RBP8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 GDPD2Q9HCC8 539 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 CNPY2Q9Y2B0 182 aa8.04□□□□□ -1.12
HMGCS2-204ENST00000544913 UNCXA6NJT0 531 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 C19orf81C9J6K1 198 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 RAD21O60216 631 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 NF2P35240 595 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 STAT2P52630 851 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 FKBP1BP68106 108 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 PPIL2Q13356 520 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 MYSM1Q5VVJ2 828 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 NOSTRINQ8IVI9 506 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 RASGRP4Q8TDF6 673 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 USP28Q96RU2 1077 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 RBSNQ9H1K0 784 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 AS3MTQ9HBK9 375 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 FEM1BQ9UK73 627 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 PPP1R9AQ9ULJ8 1098 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 CSADQ9Y600 493 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 COL11A1P12107 1806 aaPredicted RBP8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 GOLGA6L4A6NEF3 574 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 hCG_1984214I3L0E3 225 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 CELF2O95319 508 aaKnown RBP8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 CLK2P49760 499 aaKnown RBP8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 USP14P54578 494 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 AKAP17AQ02040 695 aaKnown RBP8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 GPAT2Q6NUI2 795 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 ARMC9Q7Z3E5 817 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 FAM160B2Q86V87 743 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 ZNF713Q8N859 430 aaPredicted RBP8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 OPTNQ96CV9 577 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 ZNF408Q9H9D4 720 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 SLC38A10Q9HBR0 1119 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 GBA2Q9HCG7 927 aaPredicted RBP8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 PCDHA6Q9UN73 950 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 PCDHA8Q9Y5H6 950 aa8.03□□□□□ -1.12
HMGCS2-204ENST00000544913 SPDYE16A6NNV3 312 aaPredicted RBP8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 CXCL11O14625 94 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 CAVIN2O95810 425 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 PTPAQ15257 358 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 PPP1R18Q6NYC8 613 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 CATSPERGQ6ZRH7 1159 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 BRAPQ7Z569 592 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 ZSCAN30Q86W11 494 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 RBM46Q8TBY0 533 aaKnown RBP8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 SLF1Q9BQI6 1058 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 RTN4Q9NQC3 1192 aaKnown RBP8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 TFIP11Q9UBB9 837 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms