RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ZNF395Q9H8N7 513 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-220ENST00000544550 CNNM1Q9NRU3 951 aa5.15□□□□□ -1.59
SNHG1-220ENST00000544550 SEPT3Q9UH03 358 aa5.15□□□□□ -1.59
SNHG1-220ENST00000544550 EGFL7Q9UHF1 273 aa5.15□□□□□ -1.59
SNHG1-220ENST00000544550 GJD2Q9UKL4 321 aa5.15□□□□□ -1.59
SNHG1-220ENST00000544550 USP3Q9Y6I4 520 aa5.15□□□□□ -1.59
SNHG1-220ENST00000544550 A0A0C4DFX4 3053 aa5.15□□□□□ -1.59
SNHG1-220ENST00000544550 DLG5Q8TDM6 1919 aa5.15□□□□□ -1.59
SNHG1-220ENST00000544550 DDX60LQ5H9U9 1706 aaKnown RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 MEN1O00255 615 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 DNM1LO00429 736 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 PLIN1O60240 522 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 CTNND1O60716 968 aaKnown RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 CYP2B6P20813 491 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 RGS2P41220 211 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 GYG1P46976 350 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 PSMA6P60900 246 aaKnown RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 CHAF1AQ13111 956 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 AAK1Q2M2I8 961 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 TMEM31Q5JXX7 168 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 TBCELQ5QJ74 424 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 ZNF295-AS1Q8N0V1 137 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 FAM84BQ96KN1 310 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 RNPC3Q96LT9 517 aaKnown RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 TSEN34Q9BSV6 310 aaKnown RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 MKNK1Q9BUB5 465 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 C2orf49Q9BVC5 232 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 STK31Q9BXU1 1019 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 MBIPQ9NS73 344 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 CHMP3Q9Y3E7 222 aa5.14□□□□□ -1.59
SNHG1-220ENST00000544550 LRRFIP2Q9Y608 721 aaKnown RBP5.14□□□□□ -1.59
SNHG1-220ENST00000544550 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 TRIM75PA6NK02 468 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 CAPN5O15484 640 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 SPINT1O43278 529 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 ICMTO60725 284 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 MAPK4P31152 587 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 GPC1P35052 558 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 ZEB1P37275 1124 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 GSK3AP49840 483 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 RNF144AP50876 292 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 CASP7P55210 303 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 RTP1P59025 263 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 GNAI1P63096 354 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 CACNB2Q08289 660 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 TCP10Q12799 353 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 GRIN2CQ14957 1233 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 TEAD4Q15561 434 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 C9orf50Q5SZB4 431 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 ALYREFQ86V81 257 aaKnown RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 CCAR1Q8IX12 1150 aaKnown RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 USP38Q8NB14 1042 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 RGS22Q8NE09 1264 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 GTF3C2Q8WUA4 911 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 LPAR1Q92633 364 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 BADQ92934 168 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 RUNDC1Q96C34 613 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 GRIP2Q9C0E4 1043 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 ZNF576Q9H609 170 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 PRDM5Q9NQX1 630 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 IFT57Q9NWB7 429 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 MORF4L1Q9UBU8 362 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 ATP11BQ9Y2G3 1177 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 DNMT3AQ9Y6K1 912 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 MYBBP1AQ9BQG0 1328 aaKnown RBP5.13□□□□□ -1.59
SNHG1-220ENST00000544550 ALPK3Q96L96 1907 aa5.13□□□□□ -1.59
SNHG1-220ENST00000544550 VCANP13611 3396 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 CEP290O15078 2479 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 PHF20L1A8MW92 1017 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 ELL2O00472 640 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-220ENST00000544550 ENTPD3O75355 529 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 ZNF853P0CG23 659 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 VSIG8P0DPA2 414 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 CCND3P30281 292 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-220ENST00000544550 NAA30Q147X3 362 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-220ENST00000544550 ECM1Q16610 540 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 CCDC27Q2M243 656 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 C1orf53Q5VUE5 145 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 MFSD14CQ5VZR4 134 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 CCDC174Q6PII3 467 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 FBXO33Q7Z6M2 555 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 LINC00528Q8N1L1 170 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 ARRDC4Q8NCT1 418 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 GPRC5AQ8NFJ5 357 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 LINS1Q8NG48 757 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 WDR66Q8TBY9 1149 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 ZDHHC1Q8WTX9 485 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 PPM1EQ8WY54 764 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 TIFAQ96CG3 184 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 ZSCAN10Q96SZ4 725 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-220ENST00000544550 P2RX7Q99572 595 aaKnown RBP5.12□□□□□ -1.59
SNHG1-220ENST00000544550 APBA2Q99767 749 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 LRFN3Q9BTN0 628 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 CWC22Q9HCG8 908 aaKnown RBP5.12□□□□□ -1.59
SNHG1-220ENST00000544550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.12□□□□□ -1.591e-323■■■■□ 19.6
SNHG1-220ENST00000544550 DDX20Q9UHI6 824 aaKnown RBP5.12□□□□□ -1.59
SNHG1-220ENST00000544550 MROH5Q6ZUA9 1318 aa5.12□□□□□ -1.59
SNHG1-220ENST00000544550 SERTM1A2A2V5 107 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms