RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 CAPNS1P04632 268 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 ITGAVP06756 1048 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 RPL10P27635 214 aaKnown RBP3.6□□□□□ -1.83
YBX3-214ENST00000544501 HOXC12P31275 282 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 KIR2DL1P43626 348 aaPredicted RBP3.6□□□□□ -1.83
YBX3-214ENST00000544501 KIR2DL2P43627 348 aaPredicted RBP3.6□□□□□ -1.83
YBX3-214ENST00000544501 RASA3Q14644 834 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 NR0B2Q15466 257 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 RALGPS1Q5JS13 557 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 RTP2Q5QGT7 225 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 EEF1DP3Q658K8 133 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 RCSD1Q6JBY9 416 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 CYP2R1Q6VVX0 501 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 WAPLQ7Z5K2 1190 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 ATG4DQ86TL0 474 aaPredicted RBP3.6□□□□□ -1.83
YBX3-214ENST00000544501 ZNF227Q86WZ6 799 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 OXR1Q8N573 874 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 MAP6Q96JE9 813 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 FCRL3Q96P31 734 aaPredicted RBP3.6□□□□□ -1.83
YBX3-214ENST00000544501 G6PC3Q9BUM1 346 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 LNPKQ9C0E8 428 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 NKX2-4Q9H2Z4 354 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 RC3H2Q9HBD1 1191 aaKnown RBP3.6□□□□□ -1.83
YBX3-214ENST00000544501 PRDM7Q9NQW5 492 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 CYP26B1Q9NR63 512 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 CTNND2Q9UQB3 1225 aa3.6□□□□□ -1.83
YBX3-214ENST00000544501 TRBV23OR9-2A0A075B6M9 112 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 A0A1W2PQU0 124 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 FGF10O15520 208 aaPredicted RBP3.59□□□□□ -1.83
YBX3-214ENST00000544501 FKTNO75072 461 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 KCNH1O95259 989 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 TBC1D8O95759 1140 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 HPXP02790 462 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 SCG5P05408 212 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 CD3EP07766 207 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 GSTM1P09488 218 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 RAC2P15153 192 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 AFMP43652 599 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 IFRD2Q12894 506 aaPredicted RBP3.59□□□□□ -1.83
YBX3-214ENST00000544501 HSP90AA2PQ14568 343 aaPredicted RBP3.59□□□□□ -1.83
YBX3-214ENST00000544501 SNX17Q15036 470 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 LONRF2Q1L5Z9 754 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 CCDC144BQ3MJ40 725 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 MTERF2Q49AM1 385 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 GTF2IRD2BQ6EKJ0 949 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 GTF2IRD2Q86UP8 949 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 LILRA2Q8N149 483 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 COPS5Q92905 334 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 PPP1R14AQ96A00 147 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 SRPK1Q96SB4 655 aaKnown RBP3.59□□□□□ -1.83
YBX3-214ENST00000544501 CDADC1Q9BWV3 514 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 AP5S1Q9NUS5 200 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 C19orf73Q9NVV2 129 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 ERVK13-1Q9NX77 482 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 SNTG2Q9NY99 539 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 USP35Q9P2H5 1018 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 ZMYM5Q9UJ78 669 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 BACE2Q9Y5Z0 518 aa3.59□□□□□ -1.83
YBX3-214ENST00000544501 A0A1W2PQ45 241 aaPredicted RBP3.58□□□□□ -1.84
YBX3-214ENST00000544501 A0A1W2PQY0 241 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 FAM221BA6H8Z2 402 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 C2orf71A6NGG8 1288 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 CCDC85CA6NKD9 419 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 FADS2P1A8MWK0 482 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 VAMP4O75379 141 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 CPP00450 1065 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 IFNGR1P15260 489 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 JUNBP17275 347 aaPredicted RBP3.58□□□□□ -1.84
YBX3-214ENST00000544501 SEPHS1P49903 392 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 IRAK1P51617 712 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 HK2P52789 917 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 PPP2R2AP63151 447 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 ZC3H12BQ5HYM0 836 aaKnown RBP3.58□□□□□ -1.84
YBX3-214ENST00000544501 HLA-DQA1Q5Y7H0 255 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 DPH6Q7L8W6 267 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 MRFAP1L1Q96HT8 127 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 HHIPL1Q96JK4 782 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 PTCHD1Q96NR3 888 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 MCMBPQ9BTE3 642 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 SPATA9Q9BWV2 254 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 ZSWIM4Q9H7M6 989 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 CWC22Q9HCG8 908 aaKnown RBP3.58□□□□□ -1.84
YBX3-214ENST00000544501 EBF1Q9UH73 591 aa3.58□□□□□ -1.84
YBX3-214ENST00000544501 CDK11AQ9UQ88 783 aaPredicted RBP3.58□□□□□ -1.84
YBX3-214ENST00000544501 GPR55Q9Y2T6 319 aaPredicted RBP3.58□□□□□ -1.84
YBX3-214ENST00000544501 WTIPA6NIX2 430 aaPredicted RBP3.57□□□□□ -1.84
YBX3-214ENST00000544501 STXBP3O00186 592 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 TBX1O43435 398 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 NRDCO43847 1150 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 FGFR1P11362 822 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 ITGB5P18084 799 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 PAMP19021 973 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 RTP1P59025 263 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 SSRP1Q08945 709 aaKnown RBP3.57□□□□□ -1.84
YBX3-214ENST00000544501 SCRN1Q12765 414 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 TESK1Q15569 626 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 DPY19L1Q2PZI1 675 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 IQCEQ6IPM2 695 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 ZPBP2Q6X784 338 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 SPATC1Q76KD6 591 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms