RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
CHD4-211ENST00000544484 SEMA3EO15041 775 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 USP17L8P0C7I0 530 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 NR5A1Q13285 461 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 ADAM9Q13443 819 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 SMYD4Q8IYR2 804 aaPredicted RBP14.12□□□□□ -0.15
CHD4-211ENST00000544484 SYCE1Q8N0S2 351 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 DYNLL2Q96FJ2 89 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 NACA2Q9H009 215 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 M0QZ92 97 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 NDUFAB1O14561 156 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 CDC25AP30304 524 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 TEKT3Q9BXF9 490 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 ZMYND15Q9H091 742 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 SAR1BQ9Y6B6 198 aa14.12□□□□□ -0.15
CHD4-211ENST00000544484 HEG1Q9ULI3 1381 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 GOLGA6BA6NDN3 693 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 LONRF2Q1L5Z9 754 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 CASC4Q6P4E1 433 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 INTS8Q75QN2 995 aaKnown RBP14.11□□□□□ -0.15
CHD4-211ENST00000544484 C10orf67Q8IYJ2 551 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 ANKRD13CQ8N6S4 541 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 NUCKS1Q9H1E3 243 aaKnown RBP14.11□□□□□ -0.15
CHD4-211ENST00000544484 HINFPQ9BQA5 517 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 HSPA1LP34931 641 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 YARSP54577 528 aaKnown RBP14.11□□□□□ -0.15
CHD4-211ENST00000544484 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
CHD4-211ENST00000544484 PABPC4Q13310 644 aaKnown RBP eCLIP14.11□□□□□ -0.151e-9■■■□□ 18.4
CHD4-211ENST00000544484 BSPRYQ5W0U4 402 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 ADAT2Q7Z6V5 191 aaKnown RBP14.11□□□□□ -0.15
CHD4-211ENST00000544484 GRAMD1CQ8IYS0 662 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 ANO3Q9BYT9 981 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 ODF2LQ9ULJ1 636 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 LARGE1O95461 756 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 ATP5DP30049 168 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 ALDH3A1P30838 453 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 IGBP1P78318 339 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 SLC39A14Q15043 492 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 SLFNL1Q499Z3 407 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 GALNT17Q6IS24 598 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 PPM1KQ8N3J5 372 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 SMC1BQ8NDV3 1235 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 AMFRQ9UKV5 643 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 TSPOAP1O95153 1857 aa14.11□□□□□ -0.15
CHD4-211ENST00000544484 SYNMO15061 1565 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 KCNK3O14649 394 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 SUSD4Q5VX71 490 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 IWS1Q96ST2 819 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 AMNQ9BXJ7 453 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 LRRIQ4A6NIV6 560 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 IFNB1P01574 187 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 SPATA1Q5VX52 437 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 ARMCX5Q6P1M9 558 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 ZSWIM5Q9P217 1185 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 LARSQ9P2J5 1176 aaKnown RBP14.1□□□□□ -0.15
CHD4-211ENST00000544484 DDX41Q9UJV9 622 aaKnown RBP14.1□□□□□ -0.15
CHD4-211ENST00000544484 SNAP23O00161 211 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 RAD17O75943 681 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 LONP1P36776 959 aaKnown RBP14.1□□□□□ -0.15
CHD4-211ENST00000544484 RBM6P78332 1123 aaKnown RBP14.1□□□□□ -0.15
CHD4-211ENST00000544484 GOLGA8FQ08AF8 430 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 GOLGA8DPQ0D2H9 430 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 PAK2Q13177 524 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 SULF1Q8IWU6 871 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 FMNL1O95466 1100 aaPredicted RBP14.1□□□□□ -0.15
CHD4-211ENST00000544484 GUCY2FP51841 1108 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 GBP6Q6ZN66 633 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 COA7Q96BR5 231 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 RNF26Q9BY78 433 aaPredicted RBP14.1□□□□□ -0.15
CHD4-211ENST00000544484 PPP2R2CQ9Y2T4 447 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 COL4A3BPQ9Y5P4 624 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 VPS41P49754 854 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 PPP2R5CQ13362 524 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 USP17L2Q6R6M4 530 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 AIFM3Q96NN9 605 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 PIGSQ96S52 555 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 KDM5DQ9BY66 1539 aa14.1□□□□□ -0.15
CHD4-211ENST00000544484 DPY19L2Q6NUT2 758 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 TRIML1Q8N9V2 468 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 CCDC51Q96ER9 411 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 MMS19Q96T76 1030 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 PIH1D3Q9NQM4 214 aaKnown RBP14.09□□□□□ -0.15
CHD4-211ENST00000544484 TTC37Q6PGP7 1564 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 STK10O94804 968 aaKnown RBP14.09□□□□□ -0.15
CHD4-211ENST00000544484 ITIH3Q06033 890 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 MCF2L2Q86YR7 1114 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 ANKFY1Q9P2R3 1169 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
CHD4-211ENST00000544484 CCDC160A6NGH7 325 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 PCP11498 1178 aaKnown RBP14.09□□□□□ -0.15
CHD4-211ENST00000544484 RASGRF1Q13972 1273 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 LRRC41Q15345 812 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 HLFQ16534 295 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 ODR4Q5SWX8 454 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 NRBP1Q9UHY1 535 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 RABGAP1Q9Y3P9 1069 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 CNGA1P29973 690 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 ZBTB8OSQ8IWT0 167 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 DCPSQ96C86 337 aaKnown RBP14.09□□□□□ -0.15
CHD4-211ENST00000544484 ABCA8O94911 1581 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms