RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 SHROOM1Q2M3G4 852 aaPredicted RBP18.25■□□□□ 0.51
SPDEF-202ENST00000544425 KCTD1Q719H9 257 aa18.25■□□□□ 0.51
SPDEF-202ENST00000544425 REXO1Q8N1G1 1221 aaKnown RBP18.25■□□□□ 0.51
SPDEF-202ENST00000544425 A0A087WWV3 80 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 MAP3K10Q02779 954 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 RRP1BQ14684 758 aaKnown RBP18.24■□□□□ 0.51
SPDEF-202ENST00000544425 SPATA20Q8TB22 786 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 COA7Q96BR5 231 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 RIC8AQ9NPQ8 531 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 WNT10BO00744 389 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 ADCY7P51828 1080 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 ZNF280AP59817 542 aaPredicted RBP18.24■□□□□ 0.51
SPDEF-202ENST00000544425 JAG1P78504 1218 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 DTHD1Q6ZMT9 781 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 SH3RF1Q7Z6J0 888 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 NEK8Q86SG6 692 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 PLA2G4DQ86XP0 818 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 GLT8D2Q9H1C3 349 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 MYOZ2Q9NPC6 264 aa18.24■□□□□ 0.51
SPDEF-202ENST00000544425 PPP1R1BQ9UD71 204 aaPredicted RBP18.24■□□□□ 0.51
SPDEF-202ENST00000544425 BAZ2BQ9UIF8 2168 aaKnown RBP18.24■□□□□ 0.51
SPDEF-202ENST00000544425 SMTNL1A8MU46 457 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 USP17L10C9JJH3 530 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 BIN1O00499 593 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 PTMAP06454 111 aaKnown RBP18.23■□□□□ 0.51
SPDEF-202ENST00000544425 SLC16A2P36021 539 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.23■□□□□ 0.51
SPDEF-202ENST00000544425 PDILTQ8N807 584 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 TRIML1Q8N9V2 468 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 PGAP2Q9UHJ9 254 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 BCS1LQ9Y276 419 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 MYH8P13535 1937 aa18.23■□□□□ 0.51
SPDEF-202ENST00000544425 A0A087X0B3 334 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 IKBKBO14920 756 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 FOXN1O15353 648 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
SPDEF-202ENST00000544425 PTGER2P43116 358 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 MRPL12P52815 198 aaKnown RBP18.22■□□□□ 0.51
SPDEF-202ENST00000544425 IQUBQ8NA54 791 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 VEZTQ9HBM0 779 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 BIN2Q9UBW5 565 aaPredicted RBP18.22■□□□□ 0.51
SPDEF-202ENST00000544425 NDUFB10O96000 172 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 CLK2P49760 499 aaKnown RBP18.22■□□□□ 0.51
SPDEF-202ENST00000544425 ZNF75DP51815 510 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 BTNL9Q6UXG8 535 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 AOPEPQ8N6M6 819 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 TBCKQ8TEA7 893 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 DPF2Q92785 391 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 DHX58Q96C10 678 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 TRIM5Q9C035 493 aa18.22■□□□□ 0.51
SPDEF-202ENST00000544425 TPM3P06753 285 aa18.21■□□□□ 0.51
SPDEF-202ENST00000544425 E2F4Q16254 413 aa18.21■□□□□ 0.51
SPDEF-202ENST00000544425 SMARCE1Q969G3 411 aa18.21■□□□□ 0.51
SPDEF-202ENST00000544425 PAGE5Q96GU1 130 aa18.21■□□□□ 0.51
SPDEF-202ENST00000544425 TMEM60Q9H2L4 133 aa18.21■□□□□ 0.51
SPDEF-202ENST00000544425 ZKSCAN5Q9Y2L8 839 aa18.21■□□□□ 0.51
SPDEF-202ENST00000544425 SMC2O95347 1197 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 CLCN1P35523 988 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 TXLNAP40222 546 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 TNNI2P48788 182 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 LETM2Q2VYF4 491 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 NBPF9Q3BBW0 867 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 JAKMIP3Q5VZ66 844 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 CUL5Q93034 780 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 AK8Q96MA6 479 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 TMEM39BQ9GZU3 492 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 ARHGEF10LQ9HCE6 1279 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 MAN1B1Q9UKM7 699 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 TMX2Q9Y320 296 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 FER1L6Q2WGJ9 1857 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 A0A1W2PRG0 241 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 GOLGA6L6A8MZA4 724 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 FZD9O00144 591 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 CCNT1O60563 726 aaKnown RBP18.2■□□□□ 0.5
SPDEF-202ENST00000544425 BMP3P12645 472 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 MSNP26038 577 aaKnown RBP18.2■□□□□ 0.5
SPDEF-202ENST00000544425 CDC25BP30305 580 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 MORC3Q14149 939 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 QRICH1Q2TAL8 776 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 CT47A1Q5JQC4 288 aaPredicted RBP18.2■□□□□ 0.5
SPDEF-202ENST00000544425 MLKLQ8NB16 471 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 MRFAP1L1Q96HT8 127 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 CCSER1Q9C0I3 900 aa18.2■□□□□ 0.5
SPDEF-202ENST00000544425 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.2■□□□□ 0.5
SPDEF-202ENST00000544425 PRR29P0C7W0 189 aa18.19■□□□□ 0.5
SPDEF-202ENST00000544425 TPM4P67936 248 aa18.19■□□□□ 0.5
SPDEF-202ENST00000544425 NCAPHQ15003 741 aa18.19■□□□□ 0.5
SPDEF-202ENST00000544425 PSTPIP2Q9H939 334 aa18.19■□□□□ 0.5
SPDEF-202ENST00000544425 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
SPDEF-202ENST00000544425 ZBTB21Q9ULJ3 1066 aa18.19■□□□□ 0.5
SPDEF-202ENST00000544425 RAD21O60216 631 aa18.18■□□□□ 0.5
SPDEF-202ENST00000544425 NEMFO60524 1076 aa18.18■□□□□ 0.5
SPDEF-202ENST00000544425 OR52Z1P0C646 297 aa18.18■□□□□ 0.5
SPDEF-202ENST00000544425 BMP6P22004 513 aa18.18■□□□□ 0.5
SPDEF-202ENST00000544425 CDC37Q16543 378 aaPredicted RBP18.18■□□□□ 0.5
SPDEF-202ENST00000544425 ISM2Q6H9L7 571 aa18.18■□□□□ 0.5
SPDEF-202ENST00000544425 GSDMAQ96QA5 445 aa18.18■□□□□ 0.5
SPDEF-202ENST00000544425 DACH1Q9UI36 760 aa18.18■□□□□ 0.5
SPDEF-202ENST00000544425 BRCA1P38398 1863 aaKnown RBP18.18■□□□□ 0.5
SPDEF-202ENST00000544425 CAP2P40123 477 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms