RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 COPB2P35606 906 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 GNASQ5JWF2 1037 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 PSRC1Q6PGN9 363 aaPredicted RBP11.42□□□□□ -0.58
C2CD3-220ENST00000544293 ARMCX2Q7L311 632 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 ITPRIPQ8IWB1 547 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 TMEM199Q8N511 208 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 PCSK9Q8NBP7 692 aaKnown RBP11.42□□□□□ -0.58
C2CD3-220ENST00000544293 BOLA2Q9H3K6 86 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 EPHX3Q9H6B9 360 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 SLC38A10Q9HBR0 1119 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 RAVER2Q9HCJ3 691 aaKnown RBP11.42□□□□□ -0.58
C2CD3-220ENST00000544293 NCOR1O75376 2440 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 MYH1P12882 1939 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 SOWAHBA6NEL2 793 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 EPOPA6NHQ4 379 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 RBAK-RBAKDNI3L0D1 243 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 FGBP02675 491 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 KCNQ1P51787 676 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 CCL23P55773 120 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 CNTN2Q02246 1040 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 UBE3CQ15386 1083 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 CXCL17Q6UXB2 119 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 OTOP2Q7RTS6 562 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 ERC1Q8IUD2 1116 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 CCDC144CPQ8IYA2 1237 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 CPXCR1Q8N123 301 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 FAM133AQ8N9E0 248 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 NOC4LQ9BVI4 516 aaKnown RBP11.41□□□□□ -0.58
C2CD3-220ENST00000544293 TRPV6Q9H1D0 765 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 GOPCQ9HD26 462 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 NYAP2Q9P242 653 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
C2CD3-220ENST00000544293 ZNF536O15090 1300 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 MROH7Q68CQ1 1323 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 XIRP2A4UGR9 3374 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 GSG1L2A8MUP6 293 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 ATP5JP18859 108 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 POU3F3P20264 500 aaPredicted RBP11.4□□□□□ -0.58
C2CD3-220ENST00000544293 RAB30Q15771 203 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
C2CD3-220ENST00000544293 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 KHSRPQ92945 711 aaKnown RBP eCLIP11.4□□□□□ -0.58
C2CD3-220ENST00000544293 MKL1Q969V6 931 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 STRBPQ96SI9 672 aaKnown RBP11.4□□□□□ -0.58
C2CD3-220ENST00000544293 HAUS7Q99871 368 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 PDGFCQ9NRA1 345 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 PAG1Q9NWQ8 432 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 MSRAQ9UJ68 235 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 SLC4A4Q9Y6R1 1079 aa11.4□□□□□ -0.58
C2CD3-220ENST00000544293 B4GALT4O60513 344 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 SMPD1P17405 629 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 SLC4A3P48751 1232 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 PSMC6P62333 389 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 SBK1Q52WX2 424 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 KRT40Q6A162 431 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 TAPT1Q6NXT6 567 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 CCDC174Q6PII3 467 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 PURBQ96QR8 312 aaKnown RBP11.39□□□□□ -0.59
C2CD3-220ENST00000544293 HIPK3Q9H422 1215 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 SLC28A3Q9HAS3 691 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 C11orf16Q9NQ32 467 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 CLIP2Q9UDT6 1046 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 MTCH2Q9Y6C9 303 aa11.39□□□□□ -0.59
C2CD3-220ENST00000544293 BDP1A6H8Y1 2624 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 APBB1O00213 710 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 TLL1O43897 1013 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 RAD21O60216 631 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 TNFAIP2Q03169 654 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 TTLL4Q14679 1199 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 SPRED2Q7Z698 418 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 STK11IPQ8N1F8 1099 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 ANKRD35Q8N283 1001 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 CLASRPQ8N2M8 674 aaKnown RBP11.38□□□□□ -0.59
C2CD3-220ENST00000544293 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 FAM122AQ96E09 287 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 KIF1BPQ96EK5 621 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 SCLYQ96I15 445 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 LRFN3Q9BTN0 628 aa11.38□□□□□ -0.59
C2CD3-220ENST00000544293 A1CFQ9NQ94 594 aaKnown RBP11.38□□□□□ -0.59
C2CD3-220ENST00000544293 CCER2I3L3R5 266 aa11.37□□□□□ -0.59
C2CD3-220ENST00000544293 ERC2O15083 957 aa11.37□□□□□ -0.59
C2CD3-220ENST00000544293 DYNC1LI2O43237 492 aaPredicted RBP11.37□□□□□ -0.59
C2CD3-220ENST00000544293 ZBED4O75132 1171 aa11.37□□□□□ -0.59
C2CD3-220ENST00000544293 IFIT2P09913 472 aaKnown RBP11.37□□□□□ -0.59
C2CD3-220ENST00000544293 HSP90AB4PQ58FF6 505 aa11.37□□□□□ -0.59
C2CD3-220ENST00000544293 FTSJ3Q8IY81 847 aaKnown RBP11.37□□□□□ -0.59
C2CD3-220ENST00000544293 CEP95Q96GE4 821 aa11.37□□□□□ -0.59
C2CD3-220ENST00000544293 EPB41L4AQ9HCS5 686 aaPredicted RBP11.37□□□□□ -0.59
C2CD3-220ENST00000544293 CD320Q9NPF0 282 aa11.37□□□□□ -0.59
C2CD3-220ENST00000544293 MTMR4Q9NYA4 1195 aa11.37□□□□□ -0.59
C2CD3-220ENST00000544293 PCDHA11Q9Y5I1 949 aa11.37□□□□□ -0.59
C2CD3-220ENST00000544293 MYO9BQ13459 2157 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms