RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 RBM12Q9NTZ6 932 aaKnown RBP14.09□□□□□ -0.15
SMG8-202ENST00000543872 RWDD2AQ9UIY3 292 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 AMOTQ4VCS5 1084 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
SMG8-202ENST00000543872 OSBPL9Q96SU4 736 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 FOXP1Q9H334 677 aaPredicted RBP14.09□□□□□ -0.15
SMG8-202ENST00000543872 ZSWIM5Q9P217 1185 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 ANO9A1A5B4 782 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 AP1G2O75843 785 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 FAM107AO95990 144 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 GLI1P08151 1106 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 ERCC3P19447 782 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 PRCPP42785 496 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 ZKSCAN8Q15776 578 aaPredicted RBP14.09□□□□□ -0.15
SMG8-202ENST00000543872 ACCSLQ4AC99 568 aa14.09□□□□□ -0.15
SMG8-202ENST00000543872 YTHDF3Q7Z739 585 aaKnown RBP14.09□□□□□ -0.15
SMG8-202ENST00000543872 THOC1Q96FV9 657 aaKnown RBP14.09□□□□□ -0.15
SMG8-202ENST00000543872 AATFQ9NY61 560 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMG8-202ENST00000543872 MAGEC2Q9UBF1 373 aaPredicted RBP14.09□□□□□ -0.15
SMG8-202ENST00000543872 ANKRD18BA2A2Z9 1011 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 USO1O60763 962 aaKnown RBP14.08□□□□□ -0.16
SMG8-202ENST00000543872 PRDM1O75626 825 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 TMOD1P28289 359 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 FOXO4P98177 505 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 TRADDQ15628 312 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 EARS2Q5JPH6 523 aaKnown RBP14.08□□□□□ -0.16
SMG8-202ENST00000543872 TYW1BQ6NUM6 668 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 SH3RF1Q7Z6J0 888 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 DNAJC7Q99615 494 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 CAPN11Q9UMQ6 739 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 MYH10P35580 1976 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 WNT7AO00755 349 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 IFNAR1P17181 557 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 CDC25CP30307 473 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 ZNF483Q8TF39 744 aaPredicted RBP14.08□□□□□ -0.16
SMG8-202ENST00000543872 TMEM87BQ96K49 555 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 XDHP47989 1333 aa14.08□□□□□ -0.16
SMG8-202ENST00000543872 GOLGA6L10A6NI86 522 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 HEXIM1O94992 359 aaKnown RBP14.07□□□□□ -0.16
SMG8-202ENST00000543872 HLTFQ14527 1009 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMG8-202ENST00000543872 ZC3H12AQ5D1E8 599 aaKnown RBP14.07□□□□□ -0.16
SMG8-202ENST00000543872 IFT20Q8IY31 132 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 IQCKQ8N0W5 287 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 FNBP4Q8N3X1 1017 aaPredicted RBP14.07□□□□□ -0.16
SMG8-202ENST00000543872 OR2W6PQ8NHA6 318 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 RASSF8Q8NHQ8 419 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 ITFG2Q969R8 447 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 ETAA1Q9NY74 926 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMG8-202ENST00000543872 ATXN2Q99700 1313 aaKnown RBP14.07□□□□□ -0.16
SMG8-202ENST00000543872 QPCTQ16769 361 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 IRF2BP1Q8IU81 584 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 TRIM58Q8NG06 486 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 ATP6V1G3Q96LB4 118 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 IFIH1Q9BYX4 1025 aaKnown RBP14.07□□□□□ -0.16
SMG8-202ENST00000543872 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
SMG8-202ENST00000543872 LGALS16A8MUM7 142 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 BUB1O43683 1085 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 MRPL12P52815 198 aaKnown RBP14.07□□□□□ -0.16
SMG8-202ENST00000543872 HIBCHQ6NVY1 386 aaPredicted RBP14.07□□□□□ -0.16
SMG8-202ENST00000543872 TATDN2Q93075 761 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 PLIN2Q99541 437 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 TECPR2O15040 1411 aa14.07□□□□□ -0.16
SMG8-202ENST00000543872 NALCNQ8IZF0 1738 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 NUTM2BA6NNL0 878 aaPredicted RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 TMCO5BA8MYB1 307 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 NUTM2EB1AL46 878 aaPredicted RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 PMS1P54277 932 aaKnown RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 PPP1R7Q15435 360 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 ARMC3Q5W041 872 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 SPDL1Q96EA4 605 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 PLAAQ9Y263 795 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 MRC1P22897 1456 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 ARID4AP29374 1257 aaPredicted RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 LTKP29376 864 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 MYO1EQ12965 1108 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 PNMA8AQ86V59 439 aaPredicted RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 HYOU1Q9Y4L1 999 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 MAP3K15Q6ZN16 1313 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 GMNCA6NCL1 334 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 ZNF263O14978 683 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 AKR1B10O60218 316 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 BUB1BO60566 1050 aaPredicted RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 ZNF513Q8N8E2 541 aaPredicted RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 CAVIN3Q969G5 261 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 RSRC1Q96IZ7 334 aaKnown RBP14.06□□□□□ -0.16
SMG8-202ENST00000543872 KIF9Q9HAQ2 790 aa14.06□□□□□ -0.16
SMG8-202ENST00000543872 DEXIO95424 95 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 PAK2Q13177 524 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 PTGDRQ13258 359 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 PLCB4Q15147 1175 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 C6orf89Q6UWU4 347 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 CPLX4Q7Z7G2 160 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 CCDC50Q8IVM0 306 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms