RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 SMARCA5O60264 1052 aaPredicted RBP23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 OAZ1P54368 228 aa23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 NKX3-2P78367 333 aa23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 GNASQ5JWF2 1037 aa23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 ZNF444Q8N0Y2 327 aaPredicted RBP23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 KBTBD3Q8NAB2 608 aa23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 KATNBL1Q9H079 304 aa23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 ECHDC1Q9NTX5 307 aa23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 MTMR4Q9NYA4 1195 aa23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 GREB1LQ9C091 1923 aaPredicted RBP23.84■■□□□ 1.41
LPCAT3-211ENST00000543794 A0A0U1RQG5 324 aaPredicted RBP23.83■■□□□ 1.41
LPCAT3-211ENST00000543794 ARMCX2Q7L311 632 aa23.83■■□□□ 1.41
LPCAT3-211ENST00000543794 TMEM199Q8N511 208 aa23.83■■□□□ 1.41
LPCAT3-211ENST00000543794 APPBP2Q92624 585 aa23.83■■□□□ 1.41
LPCAT3-211ENST00000543794 CEP95Q96GE4 821 aa23.83■■□□□ 1.41
LPCAT3-211ENST00000543794 ZNF287Q9HBT7 754 aa23.83■■□□□ 1.41
LPCAT3-211ENST00000543794 CTAGE5O15320 804 aa23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 CSF2RAP15509 400 aa23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 TJAP1Q5JTD0 557 aa23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 FAM126BQ8IXS8 530 aa23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 CCDC144CPQ8IYA2 1237 aa23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 MIER1Q8N108 512 aa23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 GMCL1P1Q8NEA9 526 aa23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 PBX4Q9BYU1 374 aa23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 EPB41L4AQ9HCS5 686 aaPredicted RBP23.82■■□□□ 1.4
LPCAT3-211ENST00000543794 TTLL1O95922 423 aa23.81■■□□□ 1.4
LPCAT3-211ENST00000543794 FDX1P10109 184 aa23.81■■□□□ 1.4
LPCAT3-211ENST00000543794 PBX2P40425 430 aa23.81■■□□□ 1.4
LPCAT3-211ENST00000543794 GRXCR1A8MXD5 290 aa23.8■■□□□ 1.4
LPCAT3-211ENST00000543794 RNF113AO15541 343 aaKnown RBP23.8■■□□□ 1.4
LPCAT3-211ENST00000543794 GPAA1O43292 621 aa23.8■■□□□ 1.4
LPCAT3-211ENST00000543794 PRDM1O75626 825 aa23.8■■□□□ 1.4
LPCAT3-211ENST00000543794 CD4P01730 458 aa23.8■■□□□ 1.4
LPCAT3-211ENST00000543794 GNAT2P19087 354 aa23.8■■□□□ 1.4
LPCAT3-211ENST00000543794 ZNF365Q70YC5 407 aa23.8■■□□□ 1.4
LPCAT3-211ENST00000543794 FAM133AQ8N9E0 248 aa23.8■■□□□ 1.4
LPCAT3-211ENST00000543794 TLR3O15455 904 aaKnown RBP23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 ZFYP08048 801 aaPredicted RBP23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 ACRP10323 421 aa23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 BMP3P12645 472 aa23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 TDO2P48775 406 aa23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 SLFN13Q68D06 897 aa23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 PSRC1Q6PGN9 363 aaPredicted RBP23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 CCDC129Q6ZRS4 1044 aa23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 LRRC47Q8N1G4 583 aaKnown RBP23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 PPP1R12CQ9BZL4 782 aa23.79■■□□□ 1.4
LPCAT3-211ENST00000543794 MYH7P12883 1935 aa23.78■■□□□ 1.4
LPCAT3-211ENST00000543794 PATL2C9JE40 543 aaKnown RBP23.78■■□□□ 1.4
LPCAT3-211ENST00000543794 CNTN2Q02246 1040 aa23.78■■□□□ 1.4
LPCAT3-211ENST00000543794 SLC43A3Q8NBI5 491 aa23.78■■□□□ 1.4
LPCAT3-211ENST00000543794 NEDD1Q8NHV4 660 aa23.78■■□□□ 1.4
LPCAT3-211ENST00000543794 GAS2L1Q99501 681 aaPredicted RBP23.78■■□□□ 1.4
LPCAT3-211ENST00000543794 APPP05067 770 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 BEX3Q00994 111 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 TNFAIP2Q03169 654 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 AKNAD1Q5T1N1 836 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 IFNL3Q8IZI9 196 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 HERVK_113Q902F9 699 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 ACAD9Q9H845 621 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 IL23AQ9NPF7 189 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 HOMER2Q9NSB8 354 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 GNEQ9Y223 722 aaKnown RBP23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 ASTN1O14525 1302 aa23.77■■□□□ 1.4
LPCAT3-211ENST00000543794 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.76■■□□□ 1.39
LPCAT3-211ENST00000543794 SOWAHBA6NEL2 793 aa23.76■■□□□ 1.39
LPCAT3-211ENST00000543794 TMEM232C9JQI7 657 aa23.76■■□□□ 1.39
LPCAT3-211ENST00000543794 M0R2C6 588 aa23.76■■□□□ 1.39
LPCAT3-211ENST00000543794 CYP2C18P33260 490 aa23.76■■□□□ 1.39
LPCAT3-211ENST00000543794 CHURC1Q8WUH1 139 aa23.76■■□□□ 1.39
LPCAT3-211ENST00000543794 PRDM12Q9H4Q4 367 aa23.76■■□□□ 1.39
LPCAT3-211ENST00000543794 A1CFQ9NQ94 594 aaKnown RBP23.76■■□□□ 1.39
LPCAT3-211ENST00000543794 ASB14A6NK59 587 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 CABYRO75952 493 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 TSPY3P0CV98 308 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 TSPY8P0CW00 308 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 STAT2P52630 851 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 CXCL17Q6UXB2 119 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 NOL8Q76FK4 1167 aaKnown RBP23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 FAM160B2Q86V87 743 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 STAG1Q8WVM7 1258 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 ATXN2LQ8WWM7 1075 aaKnown RBP23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 GPATCH3Q96I76 525 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 AGBL1Q96MI9 1066 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 ZNF536O15090 1300 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 PLIN4Q96Q06 1357 aa23.75■■□□□ 1.39
LPCAT3-211ENST00000543794 TNFRSF10AO00220 468 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 PDE4BQ07343 736 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 RAB30Q15771 203 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 TKFCQ3LXA3 575 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 TSHZ3Q63HK5 1081 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 GMCL1Q96IK5 515 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 SEZ6LQ9BYH1 1024 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 DCTPP1Q9H773 170 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 RNF146Q9NTX7 359 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 CXXC1Q9P0U4 656 aaPredicted RBP23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 MSRAQ9UJ68 235 aa23.74■■□□□ 1.39
LPCAT3-211ENST00000543794 PLA2G6O60733 806 aa23.73■■□□□ 1.39
LPCAT3-211ENST00000543794 FGBP02675 491 aa23.73■■□□□ 1.39
LPCAT3-211ENST00000543794 TFAP4Q01664 338 aa23.73■■□□□ 1.39
LPCAT3-211ENST00000543794 ITGA7Q13683 1181 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms