RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 EIF3CQ99613 913 aaKnown RBP21.35■■□□□ 1.01
SUDS3-204ENST00000543473 CPSF1Q10570 1443 aaKnown RBP21.35■■□□□ 1.01
SUDS3-204ENST00000543473 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
SUDS3-204ENST00000543473 EPB41L5Q9HCM4 733 aa21.35■■□□□ 1.01
SUDS3-204ENST00000543473 PARP2Q9UGN5 583 aa21.35■■□□□ 1.01
SUDS3-204ENST00000543473 MED23Q9ULK4 1368 aa21.35■■□□□ 1.01
SUDS3-204ENST00000543473 HEXIM1O94992 359 aaKnown RBP21.34■■□□□ 1.01
SUDS3-204ENST00000543473 NDUFA10O95299 355 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 EEF1GP26641 437 aaKnown RBP21.34■■□□□ 1.01
SUDS3-204ENST00000543473 TOGARAM2Q6ZUX3 1019 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 TBC1D31Q96DN5 1066 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 CRKLP46109 303 aaKnown RBP21.34■■□□□ 1.01
SUDS3-204ENST00000543473 IRX5P78411 483 aaPredicted RBP21.34■■□□□ 1.01
SUDS3-204ENST00000543473 RBM26Q5T8P6 1007 aaKnown RBP21.34■■□□□ 1.01
SUDS3-204ENST00000543473 MMS22LQ6ZRQ5 1243 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 TADA2BQ86TJ2 420 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 GPCPD1Q9NPB8 672 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 KLHL14Q9P2G3 628 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 ODF2LQ9ULJ1 636 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 RASSF7Q02833 373 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 C2orf54Q08AI8 447 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 HHATQ5VTY9 493 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 DNAI2Q9GZS0 605 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 DNAJC5Q9H3Z4 198 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 CLGNO14967 610 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 E2F5Q15329 346 aa21.34■■□□□ 1.01
SUDS3-204ENST00000543473 AATFQ9NY61 560 aaKnown RBP eCLIP21.34■■□□□ 1.01
SUDS3-204ENST00000543473 FERP16591 822 aa21.33■■□□□ 1.01
SUDS3-204ENST00000543473 PPP2R5EQ16537 467 aa21.33■■□□□ 1.01
SUDS3-204ENST00000543473 FAM182BQ5T319 152 aa21.33■■□□□ 1.01
SUDS3-204ENST00000543473 MCTP2Q6DN12 878 aa21.33■■□□□ 1.01
SUDS3-204ENST00000543473 PAXIP1Q6ZW49 1069 aaPredicted RBP21.33■■□□□ 1.01
SUDS3-204ENST00000543473 FMR1NBQ8N0W7 255 aaPredicted RBP21.33■■□□□ 1.01
SUDS3-204ENST00000543473 PPRC1Q5VV67 1664 aaKnown RBP21.33■■□□□ 1.01
SUDS3-204ENST00000543473 GNA14O95837 355 aa21.33■■□□□ 1.01
SUDS3-204ENST00000543473 INF2Q27J81 1249 aa21.33■■□□□ 1.01
SUDS3-204ENST00000543473 FAM47AQ5JRC9 791 aa21.33■■□□□ 1.01
SUDS3-204ENST00000543473 MYOCDQ8IZQ8 938 aa21.33■■□□□ 1.01
SUDS3-204ENST00000543473 U2AF1L4Q8WU68 220 aaKnown RBP21.33■■□□□ 1.01
SUDS3-204ENST00000543473 CNOT6LQ96LI5 555 aaKnown RBP21.33■■□□□ 1.01
SUDS3-204ENST00000543473 ZSCAN10Q96SZ4 725 aaPredicted RBP21.33■■□□□ 1.01
SUDS3-204ENST00000543473 PEX19P40855 299 aa21.33■■□□□ 1
SUDS3-204ENST00000543473 SAP30BPQ9UHR5 308 aaKnown RBP21.33■■□□□ 1
SUDS3-204ENST00000543473 DDIT3P35638 169 aa21.33■■□□□ 1
SUDS3-204ENST00000543473 NNTQ13423 1086 aa21.33■■□□□ 1
SUDS3-204ENST00000543473 VPS52Q8N1B4 723 aa21.33■■□□□ 1
SUDS3-204ENST00000543473 RETREG2Q8NC44 543 aa21.33■■□□□ 1
SUDS3-204ENST00000543473 ST7Q9NRC1 585 aa21.33■■□□□ 1
SUDS3-204ENST00000543473 TMEM232C9JQI7 657 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 RPSAP08865 295 aaKnown RBP21.32■■□□□ 1
SUDS3-204ENST00000543473 KRT15P19012 456 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 RASSF2P50749 326 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 LONP1P36776 959 aaKnown RBP21.32■■□□□ 1
SUDS3-204ENST00000543473 POLR2FP61218 127 aaKnown RBP21.32■■□□□ 1
SUDS3-204ENST00000543473 REXO1Q8N1G1 1221 aaKnown RBP21.32■■□□□ 1
SUDS3-204ENST00000543473 FNBP4Q8N3X1 1017 aaPredicted RBP21.32■■□□□ 1
SUDS3-204ENST00000543473 AIFM3Q96NN9 605 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 FRMD3A2A2Y4 597 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 TFAP4Q01664 338 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 WDR66Q8TBY9 1149 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 KIFAP3Q92845 792 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 BPIFA3Q9BQP9 254 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 CCDC169A6NNP5 214 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 CYP27B1O15528 508 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 MFAP3LO75121 409 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 SCG2P13521 617 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 SLC39A2Q9NP94 309 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 GPR108Q9NPR9 543 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 FAM184BQ9ULE4 1060 aa21.32■■□□□ 1
SUDS3-204ENST00000543473 CTIFO43310 598 aaKnown RBP21.31■■□□□ 1
SUDS3-204ENST00000543473 STAT1P42224 750 aa21.31■■□□□ 1
SUDS3-204ENST00000543473 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
SUDS3-204ENST00000543473 FMNL1O95466 1100 aaPredicted RBP21.31■■□□□ 1
SUDS3-204ENST00000543473 ABCB4P21439 1286 aa21.31■■□□□ 1
SUDS3-204ENST00000543473 NR5A1Q13285 461 aa21.31■■□□□ 1
SUDS3-204ENST00000543473 TRIM68Q6AZZ1 485 aa21.31■■□□□ 1
SUDS3-204ENST00000543473 CCDC62Q6P9F0 684 aa21.31■■□□□ 1
SUDS3-204ENST00000543473 CXCR5P32302 372 aa21.31■■□□□ 1
SUDS3-204ENST00000543473 IL6STP40189 918 aaPredicted RBP21.31■■□□□ 1
SUDS3-204ENST00000543473 UBE3CQ15386 1083 aa21.31■■□□□ 1
SUDS3-204ENST00000543473 DPP8Q6V1X1 898 aaPredicted RBP21.31■■□□□ 1
SUDS3-204ENST00000543473 LZTS2Q9BRK4 669 aa21.31■■□□□ 1
SUDS3-204ENST00000543473 USP17L12C9JPN9 530 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 USP17L21D6R901 530 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 M0R2C6 588 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 KRT5P13647 590 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 ADCY7P51828 1080 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 ARHGAP24Q8N264 748 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 CCDC197Q8NCU1 140 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 UHMK1Q8TAS1 419 aaKnown RBP21.3■■□□□ 1
SUDS3-204ENST00000543473 CAMSAP1Q5T5Y3 1602 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 LRCH2Q5VUJ6 765 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 GREM2Q9H772 168 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 CYP2C19P33261 490 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 TECP42680 631 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 USPL1Q5W0Q7 1092 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 DHX40Q8IX18 779 aaKnown RBP21.3■■□□□ 1
SUDS3-204ENST00000543473 ZBTB22O15209 634 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 H2AFZP0C0S5 128 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 ALS2CLQ60I27 953 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms