RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 PHLPP2Q6ZVD8 1323 aa9.03□□□□□ -0.96
TRIM59-208ENST00000543469 JAK2O60674 1132 aa9.03□□□□□ -0.96
TRIM59-208ENST00000543469 PLCB2Q00722 1185 aa9.03□□□□□ -0.96
TRIM59-208ENST00000543469 RRAGBQ5VZM2 374 aa9.03□□□□□ -0.96
TRIM59-208ENST00000543469 MIGA2Q7L4E1 593 aa9.03□□□□□ -0.96
TRIM59-208ENST00000543469 RIC8AQ9NPQ8 531 aa9.03□□□□□ -0.96
TRIM59-208ENST00000543469 PFASO15067 1338 aa9.02□□□□□ -0.96
TRIM59-208ENST00000543469 NRXN2Q9P2S2 1712 aa9.02□□□□□ -0.96
TRIM59-208ENST00000543469 H0YCG3 227 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 TBCAO75347 108 aaKnown RBP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 SHMT1P34896 483 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 USP11P51784 963 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 KIF23Q02241 960 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 NOL9Q5SY16 702 aaKnown RBP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 ADALQ6DHV7 355 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 SAMD7Q7Z3H4 446 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 SMC1BQ8NDV3 1235 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 MXD3Q9BW11 206 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 VPS54Q9P1Q0 977 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 YDJCA8MPS7 323 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 PPIL2Q13356 520 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 ARHGEF16Q5VV41 709 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 CCDC174Q6PII3 467 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 TXLNBQ8N3L3 684 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 TMEM87AQ8NBN3 555 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 NLGN2Q8NFZ4 835 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 PIGSQ96S52 555 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 GMLQ99445 158 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 FAM198AQ9UFP1 575 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 PALM3A6NDB9 673 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 OR52Z1P0C646 297 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 ALAS1P13196 640 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 HOXD10P28358 340 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 DNM1Q05193 864 aaKnown RBP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 ZYXQ15942 572 aaKnown RBP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 LETM2Q2VYF4 491 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 USP37Q86T82 979 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 JPH2Q9BR39 696 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 GBA2Q9HCG7 927 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-208ENST00000543469 IRS2Q9Y4H2 1338 aa9.02□□□□□ -0.97
TRIM59-208ENST00000543469 MANSC4A6NHS7 340 aaPredicted RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 NDUFB10O96000 172 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 PDHBP11177 359 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 SPAG1Q07617 926 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 CT47A1Q5JQC4 288 aaPredicted RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 MOXD1Q6UVY6 613 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 TIGD1Q96MW7 591 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 TEKT3Q9BXF9 490 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 ACAD9Q9H845 621 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 TNRC6CQ9HCJ0 1690 aaKnown RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 CHADLQ6NUI6 762 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 ZNF579Q8NAF0 562 aaKnown RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 SLC44A5Q8NCS7 719 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 TMEM39BQ9GZU3 492 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 MYH13Q9UKX3 1938 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 CCNT1O60563 726 aaKnown RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 CFBP00751 764 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 KCNA3P22001 575 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 FAM83BQ5T0W9 1011 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 ANKRD35Q8N283 1001 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 LEO1Q8WVC0 666 aaPredicted RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 GZF1Q9H116 711 aaPredicted RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 SPC25Q9HBM1 224 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 TBX3O15119 743 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 DDNO94850 711 aaPredicted RBP9.01□□□□□ -0.97
TRIM59-208ENST00000543469 CMA1P23946 247 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 MCM7P33993 719 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 BACE1P56817 501 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 PRKG1Q13976 671 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 SLC39A14Q15043 492 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 NSMFQ6X4W1 530 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 FAM20AQ96MK3 541 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 TEX13BQ9BXU2 312 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 CNPY2Q9Y2B0 182 aa9.01□□□□□ -0.97
TRIM59-208ENST00000543469 LOC102724159A0A0B4J2E5 919 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 GABPAQ06546 454 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 PDE4DQ08499 809 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 TROAPQ12815 778 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 NFIAQ12857 509 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 SPP2Q13103 211 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 PWP2Q15269 919 aaKnown RBP9□□□□□ -0.97
TRIM59-208ENST00000543469 SLFNL1Q499Z3 407 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 JAKMIP3Q5VZ66 844 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 KCTD1Q719H9 257 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 SV2BQ7L1I2 683 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 OTUD6AQ7L8S5 288 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 EXOC1Q9NV70 894 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 TFIP11Q9UBB9 837 aaKnown RBP9□□□□□ -0.97
TRIM59-208ENST00000543469 ASB14A6NK59 587 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 PRPHP41219 470 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 EPS15P42566 896 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 FAM160B1Q5W0V3 765 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 CCDC65Q8IXS2 484 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 RPAP3Q9H6T3 665 aaPredicted RBP9□□□□□ -0.97
TRIM59-208ENST00000543469 BICDL2A1A5D9 508 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 POTEB2H3BUK9 544 aa9□□□□□ -0.97
TRIM59-208ENST00000543469 MAFGO15525 162 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms