RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 GOLGA6DP0CG33 693 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 TECP42680 631 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 CRKP46108 304 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC92Q53HC0 331 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 CAPN10Q9HC96 672 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 GOLGA6AQ9NYA3 693 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 TXNDC16Q9P2K2 825 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 RIMBP3CA6NJZ7 1639 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 RIMBP3BA6NNM3 1639 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 RIMBP3Q9UFD9 1639 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 PLEKHG2Q9H7P9 1386 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC189A1A4V9 331 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 LRRIQ4A6NIV6 560 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 DAPK3O43293 454 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 IRF5Q13568 498 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC155Q8N6L0 562 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 VPS37AQ8NEZ2 397 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CD209Q9NNX6 404 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 MINPP1Q9UNW1 487 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC66A2RUB6 948 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CTAGE15A4D2H0 777 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 GRIN3BO60391 1043 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CTAGE8P0CG41 777 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 FERP16591 822 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 YWHAEP62258 255 aaKnown RBP7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 ME3Q16798 604 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CTAGE6Q86UF2 777 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 FAM160B2Q86V87 743 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CTAGE4Q8IX94 777 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 STAMQ92783 540 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CELF1Q92879 486 aaKnown RBP7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF341Q9BYN7 854 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 STAP2Q9UGK3 403 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 MTUS1Q9ULD2 1270 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 GUCA1BQ9UMX6 200 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 GAS8O95995 478 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 BCRP11274 1271 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 GSPT1P15170 499 aaKnown RBP7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 SEPT14Q6ZU15 432 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CDC37L1Q7L3B6 337 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 APOBEC3FQ8IUX4 373 aaKnown RBP7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 FAM178BQ8IXR5 827 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 RDH13Q8NBN7 331 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 SLC7A3Q8WY07 619 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 DNAI1Q9UI46 699 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 AGTPBP1Q9UPW5 1226 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 PRKAB2O43741 272 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 PFKFB2O60825 505 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 POSTNQ15063 836 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC14Q49A88 953 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 LRCH2Q5VUJ6 765 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 TMEM179Q6ZVK1 233 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 KIAA1524Q8TCG1 905 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 RPS6KC1Q96S38 1066 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 WRNIP1Q96S55 665 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 ANO3Q9BYT9 981 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 TDRD3Q9H7E2 651 aaKnown RBP7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 POLR3EQ9NVU0 708 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 SPATA31A1Q5TZJ5 1347 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CLTCL1P53675 1640 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 SLC16A2P36021 539 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CACNB3P54284 484 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 CYP4A11Q02928 519 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 DMP1Q13316 513 aaPredicted RBP7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 TFDP1Q14186 410 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 DCUN1D2Q6PH85 259 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 KDM2BQ8NHM5 1336 aa7.63□□□□□ -1.19
SRGAP1-206ENST00000543397 ADCY9O60503 1353 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 PTPRMP28827 1452 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 K7ENM7 598 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 ATF7P17544 494 aaPredicted RBP7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 UBXN2AP68543 259 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 TRIM14Q14142 442 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 INCENPQ9NQS7 918 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 RTEL1Q9NZ71 1219 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 ARIH1Q9Y4X5 557 aaPredicted RBP7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 CTAGE9A4FU28 777 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 BTBD18B2RXH4 712 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 DTNBO60941 627 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 SEL1L2Q5TEA6 688 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 SYDE2Q5VT97 1194 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 COL4A3BPQ9Y5P4 624 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 USP31Q70CQ4 1352 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 A0A1W2PRG0 241 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 SHTN1A0MZ66 631 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 GH2P01242 217 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 TNNC2P02585 160 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 Q3C1V9 767 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 EEPD1Q7L9B9 569 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 IGSF22Q8N9C0 903 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 GOLGA5Q8TBA6 731 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 MAP4K1Q92918 833 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 DYNLL2Q96FJ2 89 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 PPP1R9BQ96SB3 815 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 RIOK1Q9BRS2 568 aaKnown RBP7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 RNF26Q9BY78 433 aaPredicted RBP7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 ZSWIM6Q9HCJ5 1215 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 NUB1Q9Y5A7 615 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 FAM169AQ9Y6X4 670 aa7.62□□□□□ -1.19
SRGAP1-206ENST00000543397 GLI2P10070 1586 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms