RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 FLOT1O75955 427 aa18.52■□□□□ 0.56
TRIM65-204ENST00000543309 XBP1P17861 261 aa18.52■□□□□ 0.56
TRIM65-204ENST00000543309 TRAF1Q13077 416 aa18.52■□□□□ 0.56
TRIM65-204ENST00000543309 GADL1Q6ZQY3 521 aa18.52■□□□□ 0.56
TRIM65-204ENST00000543309 PIGSQ96S52 555 aa18.52■□□□□ 0.56
TRIM65-204ENST00000543309 ALG1Q9BT22 464 aa18.52■□□□□ 0.56
TRIM65-204ENST00000543309 SH3GLB2Q9NR46 395 aa18.52■□□□□ 0.56
TRIM65-204ENST00000543309 PPFIA3O75145 1194 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 KIF23Q02241 960 aaPredicted RBP18.51■□□□□ 0.55
TRIM65-204ENST00000543309 COG2Q14746 738 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 TREML2Q5T2D2 321 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 LARP1BQ659C4 914 aaKnown RBP18.51■□□□□ 0.55
TRIM65-204ENST00000543309 RANBP17Q9H2T7 1088 aaKnown RBP18.51■□□□□ 0.55
TRIM65-204ENST00000543309 VAT1LQ9HCJ6 419 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 FBXO28Q9NVF7 368 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 HOXC10Q9NYD6 342 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 PNMA2Q9UL42 364 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 ADAMTS5Q9UNA0 930 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 A0A0G2JMZ2 1700 aa18.51■□□□□ 0.55
TRIM65-204ENST00000543309 TNRC18O15417 2968 aaPredicted RBP18.5■□□□□ 0.55
TRIM65-204ENST00000543309 BAZ2BQ9UIF8 2168 aaKnown RBP18.5■□□□□ 0.55
TRIM65-204ENST00000543309 CCL15-CCL14A0A0B4J2E2 113 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 TESPA1A2RU30 521 aaPredicted RBP18.5■□□□□ 0.55
TRIM65-204ENST00000543309 MANSC4A6NHS7 340 aaPredicted RBP18.5■□□□□ 0.55
TRIM65-204ENST00000543309 SYT1P21579 422 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 DSG3P32926 999 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 CDC37Q16543 378 aaPredicted RBP18.5■□□□□ 0.55
TRIM65-204ENST00000543309 CCL15Q16663 113 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 GPAT2Q6NUI2 795 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 LBX2Q6XYB7 198 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 ANKRD23Q86SG2 305 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 KIFC2Q96AC6 838 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 BARHL2Q9NY43 387 aa18.5■□□□□ 0.55
TRIM65-204ENST00000543309 STX6O43752 255 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 DTNBO60941 627 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 INHBEP58166 350 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 QRICH1Q2TAL8 776 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 PPP1R18Q6NYC8 613 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 HOMER1Q86YM7 354 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 MB21D1Q8N884 522 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 CCDC148Q8NFR7 591 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 FBXO18Q8NFZ0 1043 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 CCDC12Q8WUD4 166 aaPredicted RBP18.49■□□□□ 0.55
TRIM65-204ENST00000543309 SLC38A10Q9HBR0 1119 aa18.49■□□□□ 0.55
TRIM65-204ENST00000543309 ZCCHC17Q9NP64 241 aaKnown RBP18.49■□□□□ 0.55
TRIM65-204ENST00000543309 hCG_1642624A0A1W2PR95 340 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 VWA5AO00534 786 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 OAZ1P54368 228 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 IRX3P78415 501 aaPredicted RBP18.48■□□□□ 0.55
TRIM65-204ENST00000543309 NUCB2P80303 420 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 TRIM29Q14134 588 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 WWC2Q6AWC2 1192 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 TEX2Q8IWB9 1127 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 GTF3C2Q8WUA4 911 aaPredicted RBP18.48■□□□□ 0.55
TRIM65-204ENST00000543309 BRI3BPQ8WY22 251 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 AIFM3Q96NN9 605 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 AMNQ9BXJ7 453 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 RNF186Q9NXI6 227 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 CHMP5Q9NZZ3 219 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 PNMA3Q9UL41 463 aa18.48■□□□□ 0.55
TRIM65-204ENST00000543309 ESYT2A0FGR8 921 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 SPDYE16A6NNV3 312 aaPredicted RBP18.47■□□□□ 0.55
TRIM65-204ENST00000543309 STXBP3O00186 592 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 ATP2A1O14983 1001 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 ZBED4O75132 1171 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 ICAM1P05362 532 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 OSBPP22059 807 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 GALNT17Q6IS24 598 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 HEATR3Q7Z4Q2 680 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 FBXO11Q86XK2 927 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 ATG4CQ96DT6 458 aa18.47■□□□□ 0.55
TRIM65-204ENST00000543309 ASCC2Q9H1I8 757 aaPredicted RBP18.47■□□□□ 0.55
TRIM65-204ENST00000543309 BTBD19C9JJ37 291 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 H3BQV1 296 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 PPP1R11O60927 126 aaPredicted RBP18.46■□□□□ 0.55
TRIM65-204ENST00000543309 TRPA1O75762 1119 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 SLC34A2O95436 690 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 CALML3P27482 149 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 MKRN3Q13064 507 aaKnown RBP18.46■□□□□ 0.55
TRIM65-204ENST00000543309 KRT40Q6A162 431 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 GPKOWQ92917 476 aaPredicted RBP eCLIP18.46■□□□□ 0.55
TRIM65-204ENST00000543309 PHF20Q9BVI0 1012 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 VPS54Q9P1Q0 977 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 MTMR6Q9Y217 621 aa18.46■□□□□ 0.55
TRIM65-204ENST00000543309 COL11A1P12107 1806 aaPredicted RBP18.46■□□□□ 0.55
TRIM65-204ENST00000543309 BRD1O95696 1058 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 MMP1P03956 469 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 NAPAP54920 295 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 SREBF2Q12772 1141 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
TRIM65-204ENST00000543309 DAGLBQ8NCG7 672 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 REPS2Q8NFH8 660 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 ZMYND12Q9H0C1 365 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 GLT8D2Q9H1C3 349 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 CTDP1Q9Y5B0 961 aaPredicted RBP18.45■□□□□ 0.54
TRIM65-204ENST00000543309 PCDHA1Q9Y5I3 950 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 ZNF536O15090 1300 aa18.45■□□□□ 0.54
TRIM65-204ENST00000543309 PDHXO00330 501 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms