RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 SMCR8Q8TEV9 937 aaPredicted RBP15.98■□□□□ 0.15
PRAME-214ENST00000543184 DRC1Q96MC2 740 aa15.98■□□□□ 0.15
PRAME-214ENST00000543184 PSMB7Q99436 277 aa15.98■□□□□ 0.15
PRAME-214ENST00000543184 NAA15Q9BXJ9 866 aaKnown RBP15.98■□□□□ 0.15
PRAME-214ENST00000543184 TTF2Q9UNY4 1162 aaKnown RBP15.98■□□□□ 0.15
PRAME-214ENST00000543184 EPN1Q9Y6I3 576 aaPredicted RBP15.98■□□□□ 0.15
PRAME-214ENST00000543184 PRCPP42785 496 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
PRAME-214ENST00000543184 DYNLL1P63167 89 aaKnown RBP15.97■□□□□ 0.15
PRAME-214ENST00000543184 CYP27A1Q02318 531 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 KCTD19Q17RG1 926 aaPredicted RBP15.97■□□□□ 0.15
PRAME-214ENST00000543184 C2CD5Q86YS7 1000 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 IPO4Q8TEX9 1081 aaKnown RBP15.97■□□□□ 0.15
PRAME-214ENST00000543184 GNL3LQ9NVN8 582 aaKnown RBP15.97■□□□□ 0.15
PRAME-214ENST00000543184 PSD3Q9NYI0 1048 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 MYH6P13533 1939 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 MYH2Q9UKX2 1941 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 ANKRD36CQ5JPF3 1778 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 NDUFA10O95299 355 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 TCP11X2Q5H9J9 407 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 TTC38Q5R3I4 469 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 CYP26C1Q6V0L0 522 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 PACS2Q86VP3 889 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 TMTC1Q8IUR5 882 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 ENAHQ8N8S7 591 aaPredicted RBP15.97■□□□□ 0.15
PRAME-214ENST00000543184 CNNM2Q9H8M5 875 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 SMARCAL1Q9NZC9 954 aa15.97■□□□□ 0.15
PRAME-214ENST00000543184 MACROD2A1Z1Q3 448 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 CYP7A1P22680 504 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 HERVK_113P62684 666 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 CHRNDQ07001 517 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 SLC20A2Q08357 652 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 PUM3Q15397 648 aaKnown RBP15.96■□□□□ 0.15
PRAME-214ENST00000543184 CCDC122Q5T0U0 273 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 ELOA2Q8IYF1 753 aaPredicted RBP15.96■□□□□ 0.15
PRAME-214ENST00000543184 STAG1Q8WVM7 1258 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 LACRTQ9GZZ8 138 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 AGPAT5Q9NUQ2 364 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 CHD4Q14839 1912 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 EIF3CLB5ME19 914 aaKnown RBP15.96■□□□□ 0.15
PRAME-214ENST00000543184 PDE2AO00408 941 aaPredicted RBP15.96■□□□□ 0.15
PRAME-214ENST00000543184 MATR3P43243 847 aaKnown RBP eCLIP15.96■□□□□ 0.15
PRAME-214ENST00000543184 C2orf54Q08AI8 447 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 PAK1Q13153 545 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 DNAJC21Q5F1R6 531 aaKnown RBP15.96■□□□□ 0.15
PRAME-214ENST00000543184 LPIN2Q92539 896 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 GSDMAQ96QA5 445 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 CTAGE1Q96RT6 745 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 EIF3CQ99613 913 aaKnown RBP15.96■□□□□ 0.15
PRAME-214ENST00000543184 PHF20Q9BVI0 1012 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
PRAME-214ENST00000543184 TNRC6CQ9HCJ0 1690 aaKnown RBP15.96■□□□□ 0.14
PRAME-214ENST00000543184 SF3B3Q15393 1217 aaKnown RBP15.95■□□□□ 0.14
PRAME-214ENST00000543184 ALX1Q15699 326 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 FAM47AQ5JRC9 791 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 SLC10A5Q5PT55 438 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 IRF2BP1Q8IU81 584 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 GGCXP38435 758 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 NPY5RQ15761 445 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 WHAMMP3Q1A5X7 153 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 NACAP1Q9BZK3 213 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 MTFR1LQ9H019 292 aa15.95■□□□□ 0.14
PRAME-214ENST00000543184 UQCRFS1P1P0C7P4 283 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 SRGNP10124 158 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 SEC23AQ15436 765 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 CCDC148Q8NFR7 591 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 HDAC7Q8WUI4 952 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 EHD2Q9NZN4 543 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 CCDC196A0A1B0GTZ2 297 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 PARP1P09874 1014 aaKnown RBP15.94■□□□□ 0.14
PRAME-214ENST00000543184 IFIT1BQ5T764 474 aaKnown RBP15.94■□□□□ 0.14
PRAME-214ENST00000543184 WDR59Q6PJI9 974 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 NLGN2Q8NFZ4 835 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 BRIP1Q9BX63 1249 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 MINPP1Q9UNW1 487 aa15.94■□□□□ 0.14
PRAME-214ENST00000543184 POTEB2H3BUK9 544 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 DPEP1P16444 411 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 FGFR2P21802 821 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 POLD1P28340 1107 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 FUT2Q10981 343 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 E2F4Q16254 413 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 KRT26Q7Z3Y9 468 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 TXNRD3Q86VQ6 643 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 RASSF8Q8NHQ8 419 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 CAGE1Q8TC20 777 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 FAM71BQ8TC56 605 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 TSPYL1Q9H0U9 437 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 LIMA1Q9UHB6 759 aaKnown RBP15.93■□□□□ 0.14
PRAME-214ENST00000543184 B4DLN1 442 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 NOP2P46087 812 aaKnown RBP15.93■□□□□ 0.14
PRAME-214ENST00000543184 USP14P54578 494 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 SLC7A5Q01650 507 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 PDXDC2PQ6P474 469 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 TRAPPC11Q7Z392 1133 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 KIAA1328Q86T90 577 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 SRBD1Q8N5C6 995 aaKnown RBP15.93■□□□□ 0.14
PRAME-214ENST00000543184 GPKOWQ92917 476 aaPredicted RBP eCLIP15.93■□□□□ 0.14
PRAME-214ENST00000543184 HPCAL4Q9UM19 191 aa15.93■□□□□ 0.14
PRAME-214ENST00000543184 RPN1P04843 607 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms