RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 TLR2O60603 784 aa24.13■■□□□ 1.45
OTUB1-211ENST00000543004 MTMR8Q96EF0 704 aa24.13■■□□□ 1.45
OTUB1-211ENST00000543004 SH2B1Q9NRF2 756 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-211ENST00000543004 TSKSQ9UJT2 592 aa24.13■■□□□ 1.45
OTUB1-211ENST00000543004 ZNF214Q9UL59 606 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-211ENST00000543004 PPP1R11O60927 126 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-211ENST00000543004 ZBED4O75132 1171 aa24.13■■□□□ 1.45
OTUB1-211ENST00000543004 IFNAR1P17181 557 aa24.13■■□□□ 1.45
OTUB1-211ENST00000543004 SLC4A3P48751 1232 aa24.13■■□□□ 1.45
OTUB1-211ENST00000543004 QRICH1Q2TAL8 776 aa24.13■■□□□ 1.45
OTUB1-211ENST00000543004 AGBL1Q96MI9 1066 aa24.13■■□□□ 1.45
OTUB1-211ENST00000543004 V9GY48 417 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-211ENST00000543004 JAK2O60674 1132 aa24.12■■□□□ 1.45
OTUB1-211ENST00000543004 ECM2O94769 699 aaPredicted RBP24.12■■□□□ 1.45
OTUB1-211ENST00000543004 SMARCA1P28370 1054 aa24.12■■□□□ 1.45
OTUB1-211ENST00000543004 MAP2K1Q02750 393 aaPredicted RBP24.12■■□□□ 1.45
OTUB1-211ENST00000543004 PLS1Q14651 629 aa24.12■■□□□ 1.45
OTUB1-211ENST00000543004 C17orf99Q6UX52 265 aa24.12■■□□□ 1.45
OTUB1-211ENST00000543004 SLC26A6Q9BXS9 759 aa24.12■■□□□ 1.45
OTUB1-211ENST00000543004 ZSWIM8A7E2V4 1837 aa24.11■■□□□ 1.45
OTUB1-211ENST00000543004 K7ELQ4 463 aaPredicted RBP24.11■■□□□ 1.45
OTUB1-211ENST00000543004 BCRP11274 1271 aa24.11■■□□□ 1.45
OTUB1-211ENST00000543004 GCLCP48506 637 aaPredicted RBP24.11■■□□□ 1.45
OTUB1-211ENST00000543004 NSUN7Q8NE18 718 aaKnown RBP24.11■■□□□ 1.45
OTUB1-211ENST00000543004 WBP1LQ9NX94 342 aa24.11■■□□□ 1.45
OTUB1-211ENST00000543004 RABGAP1Q9Y3P9 1069 aa24.11■■□□□ 1.45
OTUB1-211ENST00000543004 RIPK3Q9Y572 518 aa24.11■■□□□ 1.45
OTUB1-211ENST00000543004 ZBTB5O15062 677 aa24.1■■□□□ 1.45
OTUB1-211ENST00000543004 ERVK-9P63128 1117 aa24.1■■□□□ 1.45
OTUB1-211ENST00000543004 ERVK-24P63145 666 aa24.1■■□□□ 1.45
OTUB1-211ENST00000543004 RRP36Q96EU6 259 aaKnown RBP24.1■■□□□ 1.45
OTUB1-211ENST00000543004 CTDP1Q9Y5B0 961 aaPredicted RBP24.1■■□□□ 1.45
OTUB1-211ENST00000543004 USH1GQ495M9 461 aa24.1■■□□□ 1.45
OTUB1-211ENST00000543004 HSCBQ8IWL3 235 aa24.1■■□□□ 1.45
OTUB1-211ENST00000543004 MB21D1Q8N884 522 aa24.1■■□□□ 1.45
OTUB1-211ENST00000543004 MORF4L1Q9UBU8 362 aa24.1■■□□□ 1.45
OTUB1-211ENST00000543004 PKN1Q16512 942 aa24.09■■□□□ 1.45
OTUB1-211ENST00000543004 SNRNP48Q6IEG0 339 aaKnown RBP24.09■■□□□ 1.45
OTUB1-211ENST00000543004 GPRC5AQ8NFJ5 357 aa24.09■■□□□ 1.45
OTUB1-211ENST00000543004 DDX11Q96FC9 970 aa24.09■■□□□ 1.45
OTUB1-211ENST00000543004 CFHR5Q9BXR6 569 aa24.09■■□□□ 1.45
OTUB1-211ENST00000543004 MOV10L1Q9BXT6 1211 aaKnown RBP24.09■■□□□ 1.45
OTUB1-211ENST00000543004 SPATC1LQ9H0A9 340 aa24.09■■□□□ 1.45
OTUB1-211ENST00000543004 PNMA6FA0A0J9YX94 578 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 PTPDC1A2A3K4 754 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 PRPF3O43395 683 aaKnown RBP24.08■■□□□ 1.45
OTUB1-211ENST00000543004 FMNL1O95466 1100 aaPredicted RBP24.08■■□□□ 1.45
OTUB1-211ENST00000543004 ICAM1P05362 532 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 FDPSP14324 419 aaKnown RBP24.08■■□□□ 1.45
OTUB1-211ENST00000543004 STAT3P40763 770 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 CPLX2Q6PUV4 134 aaKnown RBP24.08■■□□□ 1.45
OTUB1-211ENST00000543004 JMYQ8N9B5 988 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 GPKOWQ92917 476 aaPredicted RBP eCLIP24.08■■□□□ 1.45
OTUB1-211ENST00000543004 COA7Q96BR5 231 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 RNF26Q9BY78 433 aaPredicted RBP24.08■■□□□ 1.45
OTUB1-211ENST00000543004 PORCNQ9H237 461 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 HOMER2Q9NSB8 354 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 CCPG1Q9ULG6 757 aa24.08■■□□□ 1.45
OTUB1-211ENST00000543004 FDX1P10109 184 aa24.07■■□□□ 1.44
OTUB1-211ENST00000543004 SSRP1Q08945 709 aaKnown RBP24.07■■□□□ 1.44
OTUB1-211ENST00000543004 FAM110CQ1W6H9 321 aa24.07■■□□□ 1.44
OTUB1-211ENST00000543004 GTF3C2Q8WUA4 911 aaPredicted RBP24.07■■□□□ 1.44
OTUB1-211ENST00000543004 AIFM3Q96NN9 605 aa24.07■■□□□ 1.44
OTUB1-211ENST00000543004 TEX13BQ9BXU2 312 aa24.07■■□□□ 1.44
OTUB1-211ENST00000543004 FOXD4L1Q9NU39 408 aa24.07■■□□□ 1.44
OTUB1-211ENST00000543004 ATP2A1O14983 1001 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 CUL4AQ13619 759 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 FBXO11Q86XK2 927 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 BEGAINQ9BUH8 593 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 SAGE1Q9NXZ1 904 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 SEC63Q9UGP8 760 aaKnown RBP24.06■■□□□ 1.44
OTUB1-211ENST00000543004 MGAMO43451 1857 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 CDKL5O76039 1030 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 ALAS1P13196 640 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 OAZ1P54368 228 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 SMARCC2Q8TAQ2 1214 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 EFCC1Q9HA90 598 aa24.06■■□□□ 1.44
OTUB1-211ENST00000543004 DOCK3Q8IZD9 2030 aa24.05■■□□□ 1.44
OTUB1-211ENST00000543004 CAP1Q01518 475 aa24.05■■□□□ 1.44
OTUB1-211ENST00000543004 WWC2Q6AWC2 1192 aa24.05■■□□□ 1.44
OTUB1-211ENST00000543004 TYW1BQ6NUM6 668 aa24.05■■□□□ 1.44
OTUB1-211ENST00000543004 HEATR3Q7Z4Q2 680 aa24.05■■□□□ 1.44
OTUB1-211ENST00000543004 TRIM22Q8IYM9 498 aa24.05■■□□□ 1.44
OTUB1-211ENST00000543004 SHISA4Q96DD7 197 aa24.05■■□□□ 1.44
OTUB1-211ENST00000543004 AMNQ9BXJ7 453 aa24.05■■□□□ 1.44
OTUB1-211ENST00000543004 ORC3Q9UBD5 711 aaPredicted RBP24.05■■□□□ 1.44
OTUB1-211ENST00000543004 RBM19Q9Y4C8 960 aaKnown RBP24.05■■□□□ 1.44
OTUB1-211ENST00000543004 ERCC3P19447 782 aa24.04■■□□□ 1.44
OTUB1-211ENST00000543004 CTGFP29279 349 aa24.04■■□□□ 1.44
OTUB1-211ENST00000543004 AKAP17AQ02040 695 aaKnown RBP24.04■■□□□ 1.44
OTUB1-211ENST00000543004 PFKFB3Q16875 520 aaPredicted RBP24.04■■□□□ 1.44
OTUB1-211ENST00000543004 MUM1L1Q5H9M0 696 aa24.04■■□□□ 1.44
OTUB1-211ENST00000543004 NCAPG2Q86XI2 1143 aa24.04■■□□□ 1.44
OTUB1-211ENST00000543004 RIOX2Q8IUF8 465 aa24.04■■□□□ 1.44
OTUB1-211ENST00000543004 GJB4Q9NTQ9 266 aa24.04■■□□□ 1.44
OTUB1-211ENST00000543004 PCDHA1Q9Y5I3 950 aa24.04■■□□□ 1.44
OTUB1-211ENST00000543004 GPR25O00155 361 aa24.03■■□□□ 1.44
OTUB1-211ENST00000543004 SCG2P13521 617 aa24.03■■□□□ 1.44
OTUB1-211ENST00000543004 SPRYD3Q8NCJ5 442 aa24.03■■□□□ 1.44
OTUB1-211ENST00000543004 LLPHQ9BRT6 129 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms