RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 GPR142Q7Z601 462 aa19.91■□□□□ 0.78
RABGGTA-203ENST00000543002 NCAPG2Q86XI2 1143 aa19.91■□□□□ 0.78
RABGGTA-203ENST00000543002 CCDC144CPQ8IYA2 1237 aa19.91■□□□□ 0.78
RABGGTA-203ENST00000543002 COA7Q96BR5 231 aa19.91■□□□□ 0.78
RABGGTA-203ENST00000543002 LZTS2Q9BRK4 669 aa19.91■□□□□ 0.78
RABGGTA-203ENST00000543002 JMJD4Q9H9V9 463 aa19.91■□□□□ 0.78
RABGGTA-203ENST00000543002 DHX16O60231 1041 aaKnown RBP19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 ICAM1P05362 532 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 SMARCA1P28370 1054 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 SLC35G1Q2M3R5 365 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 PLEKHH3Q7Z736 793 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 NBPF11Q86T75 865 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 AGBL1Q96MI9 1066 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 TBC1D32Q96NH3 1257 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 RIOX1Q9H6W3 641 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 CWC22Q9HCG8 908 aaKnown RBP19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 VAT1LQ9HCJ6 419 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 RBM28Q9NW13 759 aaKnown RBP19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 PNMA2Q9UL42 364 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 NAP1L2Q9ULW6 460 aaPredicted RBP19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 RIPK3Q9Y572 518 aa19.9■□□□□ 0.78
RABGGTA-203ENST00000543002 GOLGA8AA7E2F4 631 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 GOLGA8BA8MQT2 603 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 CYTH3O43739 400 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 NEK4P51957 841 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 PRMT2P55345 433 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 PPP2R5BQ15173 497 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 CDC37Q16543 378 aaPredicted RBP19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 RTN1Q16799 776 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 WDR78Q5VTH9 848 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 MTMR8Q96EF0 704 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 SPZ1Q9BXG8 430 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 SRRDQ9UH36 339 aa19.89■□□□□ 0.77
RABGGTA-203ENST00000543002 STRNO43815 780 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 PLEKHA8P1O95397 391 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 PTPREP23469 700 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 SLC4A3P48751 1232 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 ANKRD1Q15327 319 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 PKN2Q16513 984 aaKnown RBP19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 TKFCQ3LXA3 575 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 TMTC3Q6ZXV5 915 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 SRBD1Q8N5C6 995 aaKnown RBP19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 GJD2Q9UKL4 321 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 CCPG1Q9ULG6 757 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 HPS5Q9UPZ3 1129 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 IVNS1ABPQ9Y6Y0 642 aa19.88■□□□□ 0.77
RABGGTA-203ENST00000543002 NID2Q14112 1375 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 PDIA3P30101 505 aaKnown RBP19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 METAP2P50579 478 aaKnown RBP eCLIP19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 AK2P54819 239 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 PRKCZQ05513 592 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 QRICH1Q2TAL8 776 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 MORN1Q5T089 497 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 CHST13Q8NET6 341 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 SOCS4Q8WXH5 440 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 ZNF274Q96GC6 653 aaPredicted RBP19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 FAM217BQ9NTX9 383 aaPredicted RBP19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 FBXO40Q9UH90 709 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 GABRQQ9UN88 632 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 PTPN22Q9Y2R2 807 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 DOCK3Q8IZD9 2030 aa19.87■□□□□ 0.77
RABGGTA-203ENST00000543002 CCDC196A0A1B0GTZ2 297 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 SLC15A5A6NIM6 579 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 ZBTB5O15062 677 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 ALAS1P13196 640 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 CDC27P30260 824 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 FLT3LGP49771 235 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 GRB14Q14449 540 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 COL13A1Q5TAT6 717 aaPredicted RBP19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 ABRAQ8N0Z2 381 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 PIGSQ96S52 555 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 NUDT12Q9BQG2 462 aa19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 LARP6Q9BRS8 491 aaKnown RBP19.86■□□□□ 0.77
RABGGTA-203ENST00000543002 FCER1AP12319 257 aa19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 FBXO46Q6PJ61 603 aaPredicted RBP19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 FBXO11Q86XK2 927 aa19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 CMTR1Q8N1G2 835 aaKnown RBP19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 USP6NLQ92738 828 aa19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 TRERF1Q96PN7 1200 aa19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 ACAD9Q9H845 621 aa19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 HOMER2Q9NSB8 354 aa19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 RNF146Q9NTX7 359 aa19.85■□□□□ 0.77
RABGGTA-203ENST00000543002 PNMA6FA0A0J9YX94 578 aa19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 ADD1P35611 737 aaKnown RBP19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 FUT2Q10981 343 aa19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 MAP2K5Q13163 448 aa19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 IRF5Q13568 498 aa19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 RABEP1Q15276 862 aa19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 HOMER1Q86YM7 354 aa19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 RRP36Q96EU6 259 aaKnown RBP19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 MMP19Q99542 508 aa19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 AMNQ9BXJ7 453 aa19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 BAZ2BQ9UIF8 2168 aaKnown RBP19.84■□□□□ 0.77
RABGGTA-203ENST00000543002 TAL1P17542 331 aaPredicted RBP19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 ADORA2AP29274 412 aa19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 KCTD2Q14681 263 aa19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 USH1GQ495M9 461 aa19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 MUM1L1Q5H9M0 696 aa19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 CCDC82Q8N4S0 544 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms