RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ADCK5Q3MIX3 580 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 BRDTQ58F21 947 aaPredicted RBP14.39□□□□□ -0.11
TNC-212ENST00000542877 CHURC1Q8WUH1 139 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 TRPC6Q9Y210 931 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 LAD1O00515 517 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 ADAM9Q13443 819 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 FAM26FQ5R3K3 315 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 SLC35F6Q8N357 371 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 RETREG2Q8NC44 543 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 PPP4R1Q8TF05 950 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 RIPOR2Q9Y4F9 1068 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 COL4A3BPQ9Y5P4 624 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 LIG3P49916 1009 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 RPS8P62241 208 aaKnown RBP14.39□□□□□ -0.11
TNC-212ENST00000542877 GBP5Q96PP8 586 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 UIMC1Q96RL1 719 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 TRIM6Q9C030 488 aaPredicted RBP14.39□□□□□ -0.11
TNC-212ENST00000542877 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
TNC-212ENST00000542877 IFNB1P01574 187 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 HADHQ16836 314 aaKnown RBP14.38□□□□□ -0.11
TNC-212ENST00000542877 CCDC170Q8IYT3 715 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 CPXCR1Q8N123 301 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 PLCD3Q8N3E9 789 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 SPATA31E1Q6ZUB1 1445 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 ATP7AQ04656 1500 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 THAP12O43422 761 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 PCCAP05165 728 aaPredicted RBP14.38□□□□□ -0.11
TNC-212ENST00000542877 SLC12A2P55011 1212 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 GUCY2DQ02846 1103 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 PPP2R5DQ14738 602 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 ZBTB38Q8NAP3 1195 aaPredicted RBP14.38□□□□□ -0.11
TNC-212ENST00000542877 MICAL1Q8TDZ2 1067 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 PLEKHF1Q96S99 279 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 TUBGCP2Q9BSJ2 902 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 SLC39A2Q9NP94 309 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 CARMIL3Q8ND23 1372 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 ZMYM1Q5SVZ6 1142 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 NLRX1Q86UT6 975 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 NSMCE1Q8WV22 266 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 TACO1Q9BSH4 297 aaKnown RBP14.38□□□□□ -0.11
TNC-212ENST00000542877 PASKQ96RG2 1323 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 PDE6CP51160 858 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 CNOT6LQ96LI5 555 aaKnown RBP14.38□□□□□ -0.11
TNC-212ENST00000542877 HAUS2Q9NVX0 235 aa14.38□□□□□ -0.11
TNC-212ENST00000542877 POLD1P28340 1107 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 DHTKD1Q96HY7 919 aaPredicted RBP14.37□□□□□ -0.11
TNC-212ENST00000542877 H0YCG3 227 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 EPHB4P54760 987 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 DMTNQ08495 405 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 NSUN7Q8NE18 718 aaKnown RBP14.37□□□□□ -0.11
TNC-212ENST00000542877 FAM114A2Q9NRY5 505 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 CACTINQ8WUQ7 758 aaKnown RBP14.37□□□□□ -0.11
TNC-212ENST00000542877 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 C1orf112Q9NSG2 853 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 DDX25Q9UHL0 483 aaKnown RBP14.37□□□□□ -0.11
TNC-212ENST00000542877 RCOR1Q9UKL0 485 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 PRR16Q569H4 304 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 DEPTORQ8TB45 409 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 ORAI2Q96SN7 254 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 RNF26Q9BY78 433 aaPredicted RBP14.37□□□□□ -0.11
TNC-212ENST00000542877 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 CLGNO14967 610 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 KCNQ3O43525 872 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 ATF2P15336 505 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 FAM178BQ8IXR5 827 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 SUPT20HQ8NEM7 779 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 HAUS1Q96CS2 278 aa14.37□□□□□ -0.11
TNC-212ENST00000542877 CIAO1O76071 339 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 EHHADHQ08426 723 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 DPCR1Q3MIW9 517 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 PROCA1Q8NCQ7 364 aaPredicted RBP14.36□□□□□ -0.11
TNC-212ENST00000542877 SDR42E1Q8WUS8 393 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 CARD10Q9BWT7 1032 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 ANTXR1Q9H6X2 564 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 FAN1Q9Y2M0 1017 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 FMNL1O95466 1100 aaPredicted RBP14.36□□□□□ -0.11
TNC-212ENST00000542877 MAN1A1P33908 653 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 C11orf57Q6ZUT1 292 aaPredicted RBP14.36□□□□□ -0.11
TNC-212ENST00000542877 GBP7Q8N8V2 638 aaPredicted RBP14.36□□□□□ -0.11
TNC-212ENST00000542877 LARSQ9P2J5 1176 aaKnown RBP14.36□□□□□ -0.11
TNC-212ENST00000542877 CCT5P48643 541 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 SNCBQ16143 134 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 EXOC3L4Q17RC7 722 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 USP40Q9NVE5 1235 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 ARHGAP42A6NI28 874 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 TCP10Q12799 353 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 LRRC24Q50LG9 513 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 AK8Q96MA6 479 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 VCX3AQ9NNX9 186 aa14.36□□□□□ -0.11
TNC-212ENST00000542877 CYP21A2P08686 494 aa14.35□□□□□ -0.11
TNC-212ENST00000542877 PHKG2P15735 406 aa14.35□□□□□ -0.11
TNC-212ENST00000542877 LMNB1P20700 586 aa14.35□□□□□ -0.11
TNC-212ENST00000542877 RASSF7Q02833 373 aa14.35□□□□□ -0.11
TNC-212ENST00000542877 RBL2Q08999 1139 aa14.35□□□□□ -0.11
TNC-212ENST00000542877 GPKOWQ92917 476 aaPredicted RBP eCLIP14.35□□□□□ -0.11
TNC-212ENST00000542877 GCC2Q8IWJ2 1684 aa14.35□□□□□ -0.11
TNC-212ENST00000542877 K7ENM7 598 aa14.35□□□□□ -0.11
TNC-212ENST00000542877 SUN1O94901 812 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms