RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 NOL8Q76FK4 1167 aaKnown RBP10.69□□□□□ -0.7
UBC-211ENST00000542416 RPUSD2Q8IZ73 545 aaKnown RBP10.69□□□□□ -0.7
UBC-211ENST00000542416 ZNF444Q8N0Y2 327 aaPredicted RBP10.69□□□□□ -0.7
UBC-211ENST00000542416 ADAMTS19Q8TE59 1207 aa10.69□□□□□ -0.7
UBC-211ENST00000542416 MKL1Q969V6 931 aa10.69□□□□□ -0.7
UBC-211ENST00000542416 KIFC2Q96AC6 838 aa10.69□□□□□ -0.7
UBC-211ENST00000542416 UHRF1Q96T88 793 aaPredicted RBP10.69□□□□□ -0.7
UBC-211ENST00000542416 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
UBC-211ENST00000542416 PPP1R12CQ9BZL4 782 aa10.69□□□□□ -0.7
UBC-211ENST00000542416 SLC38A10Q9HBR0 1119 aa10.69□□□□□ -0.7
UBC-211ENST00000542416 RIPK3Q9Y572 518 aa10.69□□□□□ -0.7
UBC-211ENST00000542416 A0A0G2JMZ2 1700 aa10.69□□□□□ -0.7
UBC-211ENST00000542416 MYADML2A6NDP7 307 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 TTLL1O95922 423 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 CD4P01730 458 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 ACRP10323 421 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 GNAT2P19087 354 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 RASA1P20936 1047 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 PBX2P40425 430 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 TNFAIP2Q03169 654 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 CCDC144CPQ8IYA2 1237 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 SLC43A3Q8NBI5 491 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 GMCL1P1Q8NEA9 526 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 NUP88Q99567 741 aaPredicted RBP10.68□□□□□ -0.7
UBC-211ENST00000542416 C1QTNF1Q9BXJ1 281 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 PUS7LQ9H0K6 701 aaKnown RBP10.68□□□□□ -0.7
UBC-211ENST00000542416 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 HIPK3Q9H422 1215 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 ACAD9Q9H845 621 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 RAVER2Q9HCJ3 691 aaKnown RBP10.68□□□□□ -0.7
UBC-211ENST00000542416 CLIP2Q9UDT6 1046 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 DDX19BQ9UMR2 479 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 Q9Y3F1 56 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 MUC3AQ02505 3323 aa10.68□□□□□ -0.7
UBC-211ENST00000542416 GRXCR1A8MXD5 290 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 PFKMP08237 780 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 CYP2C18P33260 490 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 ITGA7Q13683 1181 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 LRRFIP1Q32MZ4 808 aaKnown RBP10.67□□□□□ -0.7
UBC-211ENST00000542416 FAM160B2Q86V87 743 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 CHURC1Q8WUH1 139 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 STRBPQ96SI9 672 aaKnown RBP10.67□□□□□ -0.7
UBC-211ENST00000542416 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 MTMR4Q9NYA4 1195 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 CXXC1Q9P0U4 656 aaPredicted RBP10.67□□□□□ -0.7
UBC-211ENST00000542416 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 SLC4A7Q9Y6M7 1214 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 NCOR1O75376 2440 aa10.67□□□□□ -0.7
UBC-211ENST00000542416 GSG1L2A8MUP6 293 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 MINDY4BA8MYZ0 360 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 SMIM22K7EJ46 135 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 ZFYP08048 801 aaPredicted RBP10.66□□□□□ -0.7
UBC-211ENST00000542416 SLC3A2P08195 630 aaKnown RBP10.66□□□□□ -0.7
UBC-211ENST00000542416 SUPT20HL2P0C7V6 817 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 BMP3P12645 472 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 STAT2P52630 851 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 ADGRE1Q14246 886 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 CCDC85BQ15834 202 aaPredicted RBP10.66□□□□□ -0.7
UBC-211ENST00000542416 FSCN1Q16658 493 aaKnown RBP10.66□□□□□ -0.7
UBC-211ENST00000542416 SLFNL1Q499Z3 407 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 IQSEC1Q6DN90 963 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 FAM133AQ8N9E0 248 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 PANK1Q8TE04 598 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 NKX2-4Q9H2Z4 354 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 PCDHA11Q9Y5I1 949 aa10.66□□□□□ -0.7
UBC-211ENST00000542416 IGKV6D-41A0A0C4DH26 115 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 CTAGE5O15320 804 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 ADCY6O43306 1168 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
UBC-211ENST00000542416 TDO2P48775 406 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 HNRNPUQ00839 825 aaKnown RBP eCLIP10.65□□□□□ -0.7
UBC-211ENST00000542416 PDE4BQ07343 736 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 PPP2R2DQ66LE6 453 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 SLFN13Q68D06 897 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 CXCL17Q6UXB2 119 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 OTOP2Q7RTS6 562 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 TLK2Q86UE8 772 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 APPBP2Q92624 585 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 FAM122AQ96E09 287 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 GPATCH3Q96I76 525 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 FGD4Q96M96 766 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 NACAP1Q9BZK3 213 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 LRRCC1Q9C099 1032 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 KATNBL1Q9H079 304 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 HOMER2Q9NSB8 354 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 ZBTB40Q9NUA8 1239 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 GNEQ9Y223 722 aaKnown RBP10.65□□□□□ -0.7
UBC-211ENST00000542416 NAV1Q8NEY1 1877 aa10.65□□□□□ -0.7
UBC-211ENST00000542416 MYO5AQ9Y4I1 1855 aaKnown RBP10.65□□□□□ -0.7
UBC-211ENST00000542416 SMCHD1A6NHR9 2005 aa10.65□□□□□ -0.71
UBC-211ENST00000542416 TMEM232C9JQI7 657 aa10.64□□□□□ -0.71
UBC-211ENST00000542416 DYNC1LI2O43237 492 aaPredicted RBP10.64□□□□□ -0.71
UBC-211ENST00000542416 PLA2G6O60733 806 aa10.64□□□□□ -0.71
UBC-211ENST00000542416 APPP05067 770 aa10.64□□□□□ -0.71
UBC-211ENST00000542416 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
UBC-211ENST00000542416 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
UBC-211ENST00000542416 ACTN1P12814 892 aa10.64□□□□□ -0.71
UBC-211ENST00000542416 ATP2A2P16615 1042 aaKnown RBP10.64□□□□□ -0.71
UBC-211ENST00000542416 PLA2G5P39877 138 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms