RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 VAV3Q9UKW4 847 aa6.78□□□□□ -1.32
C12orf56-205ENST00000542397 ADGRF5Q8IZF2 1346 aa6.77□□□□□ -1.32
C12orf56-205ENST00000542397 DLC1Q96QB1 1528 aa6.77□□□□□ -1.33
C12orf56-205ENST00000542397 FANCGO15287 622 aa6.77□□□□□ -1.33
C12orf56-205ENST00000542397 CEACAM5P06731 702 aa6.77□□□□□ -1.33
C12orf56-205ENST00000542397 HSP90B1P14625 803 aaKnown RBP6.77□□□□□ -1.33
C12orf56-205ENST00000542397 JUNBP17275 347 aaPredicted RBP6.77□□□□□ -1.33
C12orf56-205ENST00000542397 PRKCQQ04759 706 aa6.77□□□□□ -1.33
C12orf56-205ENST00000542397 PWP1Q13610 501 aa6.77□□□□□ -1.33
C12orf56-205ENST00000542397 RGL3Q3MIN7 710 aa6.77□□□□□ -1.33
C12orf56-205ENST00000542397 ZBTB37Q5TC79 503 aa6.77□□□□□ -1.33
C12orf56-205ENST00000542397 HIRIP3Q9BW71 556 aaPredicted RBP6.77□□□□□ -1.33
C12orf56-205ENST00000542397 LNPKQ9C0E8 428 aa6.77□□□□□ -1.33
C12orf56-205ENST00000542397 RGPD8O14715 1765 aaPredicted RBP6.77□□□□□ -1.33
C12orf56-205ENST00000542397 CLSPNQ9HAW4 1339 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 TECPR2O15040 1411 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 CD8BP10966 210 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 ATF4P18848 351 aaPredicted RBP6.76□□□□□ -1.33
C12orf56-205ENST00000542397 DNAJA1P31689 397 aaKnown RBP6.76□□□□□ -1.33
C12orf56-205ENST00000542397 SV2BQ7L1I2 683 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 FAM214BQ7L5A3 538 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 UBE3DQ7Z6J8 389 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 KCT2Q8NC54 265 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 ZNF526Q8TF50 670 aaPredicted RBP6.76□□□□□ -1.33
C12orf56-205ENST00000542397 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
C12orf56-205ENST00000542397 ELMO3Q96BJ8 720 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 ASIC4Q96FT7 647 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 HEXIM2Q96MH2 286 aaKnown RBP6.76□□□□□ -1.33
C12orf56-205ENST00000542397 SYT17Q9BSW7 474 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 PRDM10Q9NQV6 1147 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 KCNQ5Q9NR82 932 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 BTG4Q9NY30 223 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 TTF2Q9UNY4 1162 aaKnown RBP6.76□□□□□ -1.33
C12orf56-205ENST00000542397 PLAGL2Q9UPG8 496 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 CDC42BPGQ6DT37 1551 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 KNDC1Q76NI1 1749 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 KIAA1210Q9ULL0 1709 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 SPATA31A3Q5VYP0 1347 aa6.76□□□□□ -1.33
C12orf56-205ENST00000542397 TMEM265A0A087WTH1 108 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 FAM83GA6ND36 823 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 RLBP1P12271 317 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 FUT4P22083 530 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 PAK2Q13177 524 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 ZNF792Q3KQV3 632 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 CDC37L1Q7L3B6 337 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 MCF2L2Q86YR7 1114 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 GPRASP2Q96D09 838 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 SEC16BQ96JE7 1060 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 HRASLS5Q96KN8 279 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 DNAJC2Q99543 621 aaKnown RBP6.75□□□□□ -1.33
C12orf56-205ENST00000542397 C14orf93Q9H972 538 aaKnown RBP6.75□□□□□ -1.33
C12orf56-205ENST00000542397 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
C12orf56-205ENST00000542397 ADGRB1O14514 1584 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 LRPPRCP42704 1394 aaKnown RBP6.74□□□□□ -1.33
C12orf56-205ENST00000542397 ABCC11Q96J66 1382 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 IGF2BP3O00425 579 aaKnown RBP eCLIP6.74□□□□□ -1.33
C12orf56-205ENST00000542397 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
C12orf56-205ENST00000542397 HSPA6P17066 643 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 GTF2F1P35269 517 aaKnown RBP eCLIP6.74□□□□□ -1.33
C12orf56-205ENST00000542397 INPP5AQ14642 412 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 GPR162Q16538 588 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 AOC3Q16853 763 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 LRFN4Q6PJG9 635 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 ZNF507Q8TCN5 953 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 TNKS2Q9H2K2 1166 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 TNS3Q68CZ2 1445 aa6.74□□□□□ -1.33
C12orf56-205ENST00000542397 PARD3Q8TEW0 1356 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 COL14A1Q05707 1796 aaKnown RBP6.73□□□□□ -1.33
C12orf56-205ENST00000542397 ITIH2P19823 946 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 CD96P40200 585 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 PTPN11Q06124 597 aaPredicted RBP6.73□□□□□ -1.33
C12orf56-205ENST00000542397 NBPF6Q5VWK0 638 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 GIMAP6Q6P9H5 292 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 HDXQ7Z353 690 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 GAL3ST3Q96A11 431 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 NBPF4Q96M43 638 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 SIN3AQ96ST3 1273 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 COPRSQ9NQ92 184 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 KBTBD4Q9NVX7 518 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 SNX11Q9Y5W9 270 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 KIF1AQ12756 1690 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 ATP10DQ9P241 1426 aa6.73□□□□□ -1.33
C12orf56-205ENST00000542397 PRAMEF27A3QJZ7 478 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 BIN1O00499 593 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 PAPLNO95428 1278 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 JAG1P78504 1218 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 TTBK2Q6IQ55 1244 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 ARMCX6Q7L4S7 300 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 CYFIP1Q7L576 1253 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 PTF1AQ7RTS3 328 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 KRT28Q7Z3Y7 464 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 PLPPR2Q96GM1 343 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 YTHDC2Q9H6S0 1430 aaKnown RBP6.72□□□□□ -1.33
C12orf56-205ENST00000542397 FMN2Q9NZ56 1722 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 SPATA31A5Q5VU36 1347 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 SPATA31A7Q8IWB4 1347 aa6.72□□□□□ -1.33
C12orf56-205ENST00000542397 LRIG2O94898 1065 aa6.71□□□□□ -1.34
C12orf56-205ENST00000542397 EOMESO95936 686 aa6.71□□□□□ -1.34
C12orf56-205ENST00000542397 RNASE1P07998 156 aaKnown RBP6.71□□□□□ -1.34
C12orf56-205ENST00000542397 COL9A2Q14055 689 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms