RNA–Protein interactions for RNA: ENST00000541669.5

LDHC-207, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-207ENST00000541669 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 DSG3P32926 999 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
LDHC-207ENST00000541669 ANKRD23Q86SG2 305 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
LDHC-207ENST00000541669 ALG1Q9BT22 464 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 MGAMO43451 1857 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
LDHC-207ENST00000541669 BTBD19C9JJ37 291 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 OSBPP22059 807 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 INHBEP58166 350 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
LDHC-207ENST00000541669 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 RGS22Q8NE09 1264 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 ADAMTS5Q9UNA0 930 aa11.24□□□□□ -0.61
LDHC-207ENST00000541669 PLXNB2O15031 1838 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 VWA5AO00534 786 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
LDHC-207ENST00000541669 XBP1P17861 261 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 DDIT3P35638 169 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 LARP1BQ659C4 914 aaKnown RBP11.23□□□□□ -0.61
LDHC-207ENST00000541669 CYP4F22Q6NT55 531 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
LDHC-207ENST00000541669 LBX2Q6XYB7 198 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 FAM177A1Q8N128 213 aaPredicted RBP11.23□□□□□ -0.61
LDHC-207ENST00000541669 ATG4CQ96DT6 458 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 AIFM3Q96NN9 605 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 ASCC2Q9H1I8 757 aaPredicted RBP11.23□□□□□ -0.61
LDHC-207ENST00000541669 ZCCHC17Q9NP64 241 aaKnown RBP11.23□□□□□ -0.61
LDHC-207ENST00000541669 SH3GLB2Q9NR46 395 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 BARHL2Q9NY43 387 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 PLXNA1Q9UIW2 1896 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 PDHXO00330 501 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 ZBED4O75132 1171 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 SYT1P21579 422 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 SREBF2Q12772 1141 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 TRAF1Q13077 416 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 NOGQ13253 232 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 TRIM29Q14134 588 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 WWC2Q6AWC2 1192 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 HEATR3Q7Z4Q2 680 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 CCDC12Q8WUD4 166 aaPredicted RBP11.23□□□□□ -0.61
LDHC-207ENST00000541669 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.61
LDHC-207ENST00000541669 PTPN18Q99952 460 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 AMNQ9BXJ7 453 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 PNMA2Q9UL42 364 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 CEP350Q5VT06 3117 aa11.23□□□□□ -0.61
LDHC-207ENST00000541669 LCTP09848 1927 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 STXBP3O00186 592 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 PPP1R11O60927 126 aaPredicted RBP11.22□□□□□ -0.61
LDHC-207ENST00000541669 ICAM1P05362 532 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 OAZ1P54368 228 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 SNAP25P60880 206 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 HERVK_113P62684 666 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 PPP1R18Q6NYC8 613 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 CCDC174Q6PII3 467 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 FBXO11Q86XK2 927 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 FAM43AQ8N2R8 423 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 REPS2Q8NFH8 660 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 CCDC148Q8NFR7 591 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 FBXO18Q8NFZ0 1043 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 GTF3C2Q8WUA4 911 aaPredicted RBP11.22□□□□□ -0.61
LDHC-207ENST00000541669 CAPNS2Q96L46 248 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 P2RX7Q99572 595 aaKnown RBP11.22□□□□□ -0.61
LDHC-207ENST00000541669 VPS54Q9P1Q0 977 aa11.22□□□□□ -0.61
LDHC-207ENST00000541669 CTDP1Q9Y5B0 961 aaPredicted RBP11.22□□□□□ -0.61
LDHC-207ENST00000541669 ZNF536O15090 1300 aa11.21□□□□□ -0.61
LDHC-207ENST00000541669 H3BQV1 296 aa11.21□□□□□ -0.61
LDHC-207ENST00000541669 STX6O43752 255 aa11.21□□□□□ -0.61
LDHC-207ENST00000541669 GRM1Q13255 1194 aa11.21□□□□□ -0.61
LDHC-207ENST00000541669 IFFO2Q5TF58 517 aa11.21□□□□□ -0.61
LDHC-207ENST00000541669 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
LDHC-207ENST00000541669 PARK7Q99497 189 aaKnown RBP11.21□□□□□ -0.61
LDHC-207ENST00000541669 CIZ1Q9ULV3 898 aaPredicted RBP11.21□□□□□ -0.61
LDHC-207ENST00000541669 PCDHA1Q9Y5I3 950 aa11.21□□□□□ -0.61
LDHC-207ENST00000541669 IGF2BP3O00425 579 aaKnown RBP eCLIP11.21□□□□□ -0.62
LDHC-207ENST00000541669 ATP2A1O14983 1001 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 TM4SF4P48230 202 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 FOSBP53539 338 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 NAPAP54920 295 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 KRT40Q6A162 431 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 OTUD7BQ6GQQ9 843 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 TYW1BQ6NUM6 668 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 IFNL1Q8IU54 200 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 COA7Q96BR5 231 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 SHISA4Q96DD7 197 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.62
LDHC-207ENST00000541669 ZNF214Q9UL59 606 aaPredicted RBP11.21□□□□□ -0.62
LDHC-207ENST00000541669 ABCB11O95342 1321 aa11.2□□□□□ -0.62
LDHC-207ENST00000541669 ESYT2A0FGR8 921 aa11.2□□□□□ -0.62
LDHC-207ENST00000541669 MMP1P03956 469 aa11.2□□□□□ -0.62
LDHC-207ENST00000541669 CYP2C8P10632 490 aa11.2□□□□□ -0.62
LDHC-207ENST00000541669 NUCB2P80303 420 aa11.2□□□□□ -0.62
LDHC-207ENST00000541669 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms