RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 WBP4O75554 376 aaKnown RBP16.74■□□□□ 0.27
HMGA2-210ENST00000541363 TMEM259Q4ZIN3 620 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 COPS6Q7L5N1 327 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 RTCBQ9Y3I0 505 aaKnown RBP16.74■□□□□ 0.27
HMGA2-210ENST00000541363 SKOR1P84550 965 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 DAB2P98082 770 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 ARHGAP45Q92619 1136 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 MAST3O60307 1309 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
HMGA2-210ENST00000541363 ADPGKQ9BRR6 497 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 PCDHB13Q9Y5F0 798 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 CPP00450 1065 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 TRIML2Q8N7C3 387 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 CBX8Q9HC52 389 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 ANGPTL8Q6UXH0 198 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 ZCRB1Q8TBF4 217 aaKnown RBP16.74■□□□□ 0.27
HMGA2-210ENST00000541363 DPH5Q9H2P9 285 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 CFTRP13569 1480 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 KSR2Q6VAB6 950 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 NLRX1Q86UT6 975 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 TPH2Q8IWU9 490 aa16.74■□□□□ 0.27
HMGA2-210ENST00000541363 MBD4O95243 580 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 CYP2J2P51589 502 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 RDH13Q8NBN7 331 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 MEIS3Q99687 375 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 ACSBG1Q96GR2 724 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 GSDMAQ96QA5 445 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 PTPN22Q9Y2R2 807 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
HMGA2-210ENST00000541363 THOC5Q13769 683 aaKnown RBP16.73■□□□□ 0.27
HMGA2-210ENST00000541363 NLRC4Q9NPP4 1024 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 EFCAB13Q8IY85 973 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 LRRC37BQ96QE4 947 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 KRT4P19013 534 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 PIK3CAP42336 1068 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 CPSF3Q9UKF6 684 aaKnown RBP16.73■□□□□ 0.27
HMGA2-210ENST00000541363 FIS1Q9Y3D6 152 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 CHEK2O96017 543 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 GRIN1Q05586 938 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 MRPL28Q13084 256 aaKnown RBP16.73■□□□□ 0.27
HMGA2-210ENST00000541363 RFX6Q8HWS3 928 aa16.73■□□□□ 0.27
HMGA2-210ENST00000541363 PYGBP11216 843 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 KLC3Q6P597 504 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 A0A1B0GW55 424 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 FOXO3O43524 673 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DUX4L2P0CJ85 424 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DUX4L3P0CJ86 424 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DUX4L4P0CJ87 422 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DUX4L5P0CJ88 424 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DUX4L6P0CJ89 424 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DUX4L7P0CJ90 424 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 GFAPP14136 432 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 ZNF408Q9H9D4 720 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DUX4Q9UBX2 424 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 B4E1Z4 1266 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 CHCHD3Q9NX63 227 aaKnown RBP16.72■□□□□ 0.27
HMGA2-210ENST00000541363 H0YCG3 227 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 IFT88Q13099 833 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 NFE2L3Q9Y4A8 694 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 ZNF263O14978 683 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 NSFP46459 744 aaKnown RBP16.72■□□□□ 0.27
HMGA2-210ENST00000541363 KIF22Q14807 665 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 RNF169Q8NCN4 708 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 TRAIPQ9BWF2 469 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 TLK1Q9UKI8 766 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 JAG2Q9Y219 1238 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 IRS4O14654 1257 aaPredicted RBP16.72■□□□□ 0.27
HMGA2-210ENST00000541363 TFCP2Q12800 502 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DDX42Q86XP3 938 aaKnown RBP eCLIP16.72■□□□□ 0.27
HMGA2-210ENST00000541363 KLHL29Q96CT2 875 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 DACH2Q96NX9 599 aa16.72■□□□□ 0.27
HMGA2-210ENST00000541363 ZYXQ15942 572 aaKnown RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 KHDRBS2Q5VWX1 349 aaKnown RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 GPIHBP1Q8IV16 184 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 GLG1Q92896 1179 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 KIF17Q9P2E2 1029 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 SLC12A6Q9UHW9 1150 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 BUB1O43683 1085 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 SLC1A4P43007 532 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 MSH2P43246 934 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 CDC26Q8NHZ8 85 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 SYNJ2BP-COX16A0A087WUM0 186 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 COX16Q9P0S2 106 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 TRPC5Q9UL62 973 aaPredicted RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 V9GY48 417 aaPredicted RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 GAS7O60861 476 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 DMP1Q13316 513 aaPredicted RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 ANGEL1Q9UNK9 670 aaKnown RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 NCF2P19878 526 aaPredicted RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 CCDC92Q53HC0 331 aaPredicted RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 ARHGEF18Q6ZSZ5 1173 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 ADAT2Q7Z6V5 191 aaKnown RBP16.71■□□□□ 0.27
HMGA2-210ENST00000541363 TEX9Q8N6V9 391 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 CEP70Q8NHQ1 597 aa16.71■□□□□ 0.27
HMGA2-210ENST00000541363 KDRP35968 1356 aa16.71■□□□□ 0.26
HMGA2-210ENST00000541363 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
HMGA2-210ENST00000541363 CARSP49589 748 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms