RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 COL4A5P29400 1685 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 GREB1LQ9C091 1923 aaPredicted RBP19.44■□□□□ 0.7
SPIDR-227ENST00000541342 EFCAB8A8MWE9 144 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 ATP2B1P20020 1258 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 SHMT1P34896 483 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 USP49Q70CQ1 688 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 GPKOWQ92917 476 aaPredicted RBP eCLIP19.44■□□□□ 0.7
SPIDR-227ENST00000541342 KIFC2Q96AC6 838 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 SERTAD1Q9UHV2 236 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 SUPT20HQ8NEM7 779 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 SRRTQ9BXP5 876 aaKnown RBP19.44■□□□□ 0.7
SPIDR-227ENST00000541342 CPVLQ9H3G5 476 aa19.44■□□□□ 0.7
SPIDR-227ENST00000541342 IGKV6D-41A0A0C4DH26 115 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 ZSCAN12O43309 604 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 SEC31AO94979 1220 aaKnown RBP19.43■□□□□ 0.7
SPIDR-227ENST00000541342 RBM5P52756 815 aaKnown RBP eCLIP19.43■□□□□ 0.7
SPIDR-227ENST00000541342 HDLBPQ00341 1268 aaKnown RBP19.43■□□□□ 0.7
SPIDR-227ENST00000541342 CLEC10AQ8IUN9 316 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 GNAQP50148 359 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 MAP3K9P80192 1104 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 SPECC1LQ69YQ0 1117 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 TYW1BQ6NUM6 668 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 MTMR4Q9NYA4 1195 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 FAM198AQ9UFP1 575 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 ACTN4O43707 911 aaKnown RBP19.43■□□□□ 0.7
SPIDR-227ENST00000541342 USP17L2Q6R6M4 530 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 SLC16A10Q8TF71 515 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 SAMSN1Q9NSI8 373 aaKnown RBP19.43■□□□□ 0.7
SPIDR-227ENST00000541342 SERPINA10Q9UK55 444 aa19.43■□□□□ 0.7
SPIDR-227ENST00000541342 STX10O60499 249 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 NLRP5P59047 1200 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 TCP10Q12799 353 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 MNS1Q8NEH6 495 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 SPATA20Q8TB22 786 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 ENOX1Q8TC92 643 aaKnown RBP19.42■□□□□ 0.7
SPIDR-227ENST00000541342 KLRF2D3W0D1 207 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 SASH3O75995 380 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 DNAJC18Q9H819 358 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 BRMS1Q9HCU9 246 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 SWAP70Q9UH65 585 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 MRFAP1Q9Y605 127 aa19.42■□□□□ 0.7
SPIDR-227ENST00000541342 APTXQ7Z2E3 356 aaKnown RBP19.41■□□□□ 0.7
SPIDR-227ENST00000541342 SH3BP5LQ7L8J4 393 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 PDILTQ8N807 584 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 DESI2Q9BSY9 194 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 IDI2Q9BXS1 227 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 UBXN6Q9BZV1 441 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 DDTLA6NHG4 134 aaPredicted RBP19.41■□□□□ 0.7
SPIDR-227ENST00000541342 EIF6P56537 245 aaKnown RBP19.41■□□□□ 0.7
SPIDR-227ENST00000541342 GNG11P61952 73 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 MTF1Q14872 753 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 WWC2Q6AWC2 1192 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 MLKLQ8NB16 471 aa19.41■□□□□ 0.7
SPIDR-227ENST00000541342 USP17L5A8MUK1 530 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 PARP1P09874 1014 aaKnown RBP19.4■□□□□ 0.7
SPIDR-227ENST00000541342 TMCO3Q6UWJ1 677 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 MYO3BQ8WXR4 1341 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 A0A087X0B3 334 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 HLA-DOAP06340 250 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 NR1I3Q14994 352 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 RSRC2Q7L4I2 434 aaKnown RBP19.4■□□□□ 0.7
SPIDR-227ENST00000541342 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 PSMD1Q99460 953 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 EHD4Q9H223 541 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 MRPL44Q9H9J2 332 aaKnown RBP19.4■□□□□ 0.7
SPIDR-227ENST00000541342 SH3GLB2Q9NR46 395 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 ZNF277Q9NRM2 450 aaPredicted RBP19.4■□□□□ 0.7
SPIDR-227ENST00000541342 MYH4Q9Y623 1939 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 TRIM75PA6NK02 468 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 TBC1D8O95759 1140 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 LRRC47Q8N1G4 583 aaKnown RBP19.4■□□□□ 0.7
SPIDR-227ENST00000541342 SPZ1Q9BXG8 430 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 UTRNP46939 3433 aa19.4■□□□□ 0.7
SPIDR-227ENST00000541342 ZNF579Q8NAF0 562 aaKnown RBP19.39■□□□□ 0.69
SPIDR-227ENST00000541342 SMARCE1Q969G3 411 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 LZTS2Q9BRK4 669 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 SRPRBQ9Y5M8 271 aaKnown RBP19.39■□□□□ 0.69
SPIDR-227ENST00000541342 ERICH4A6NGS2 130 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 FAM196BA6NMK8 535 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 PDHBP11177 359 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 CYP2C19P33261 490 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 PIK3AP1Q6ZUJ8 805 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 IRX2Q9BZI1 471 aaPredicted RBP19.39■□□□□ 0.69
SPIDR-227ENST00000541342 CSRNP2Q9H175 543 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 CEP131Q9UPN4 1083 aa19.39■□□□□ 0.69
SPIDR-227ENST00000541342 A0A0U1RQJ8 604 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 A0A1B0GTH6 734 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 STXBP3O00186 592 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 ZBTB7AO95365 584 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 CASQ1P31415 396 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 ATRIPQ8WXE1 791 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 TDRD3Q9H7E2 651 aaKnown RBP19.38■□□□□ 0.69
SPIDR-227ENST00000541342 TEX33O43247 280 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 GRIPAP1Q4V328 841 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 TAF3Q5VWG9 929 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 ARGLU1Q9NWB6 273 aaPredicted RBP19.38■□□□□ 0.69
SPIDR-227ENST00000541342 BARHL2Q9NY43 387 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 M0R2N6 131 aa19.38■□□□□ 0.69
SPIDR-227ENST00000541342 SHROOM1Q2M3G4 852 aaPredicted RBP19.38■□□□□ 0.69
SPIDR-227ENST00000541342 CC2D1AQ6P1N0 951 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms