RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 XPNPEP3Q9NQH7 507 aa17.45■□□□□ 0.38
DDX11-217ENST00000540935 PRR12Q9ULL5 1215 aa17.45■□□□□ 0.38
DDX11-217ENST00000540935 TRIOBPQ9H2D6 2365 aa17.45■□□□□ 0.38
DDX11-217ENST00000540935 ZNF536O15090 1300 aa17.45■□□□□ 0.38
DDX11-217ENST00000540935 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
DDX11-217ENST00000540935 CCDC178Q5BJE1 867 aa17.44■□□□□ 0.38
DDX11-217ENST00000540935 TMEM47Q9BQJ4 181 aa17.44■□□□□ 0.38
DDX11-217ENST00000540935 HOMER2Q9NSB8 354 aa17.44■□□□□ 0.38
DDX11-217ENST00000540935 FAM184BQ9ULE4 1060 aa17.44■□□□□ 0.38
DDX11-217ENST00000540935 SMCHD1A6NHR9 2005 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 SNAI1O95863 264 aaPredicted RBP17.43■□□□□ 0.38
DDX11-217ENST00000540935 MYCNP04198 464 aaPredicted RBP17.43■□□□□ 0.38
DDX11-217ENST00000540935 TAL1P17542 331 aaPredicted RBP17.43■□□□□ 0.38
DDX11-217ENST00000540935 MAGEA10P43363 369 aaPredicted RBP17.43■□□□□ 0.38
DDX11-217ENST00000540935 ATN1P54259 1190 aaPredicted RBP17.43■□□□□ 0.38
DDX11-217ENST00000540935 BTNL9Q6UXG8 535 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 SLC39A5Q6ZMH5 540 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 TBC1D10CQ8IV04 446 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 AGBL1Q96MI9 1066 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 ABHD16BQ9H3Z7 469 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 RNF146Q9NTX7 359 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 PRKAG2Q9UGJ0 569 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 PNMA2Q9UL42 364 aa17.43■□□□□ 0.38
DDX11-217ENST00000540935 POTEB2H3BUK9 544 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 RTP1P59025 263 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 SNX17Q15036 470 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
DDX11-217ENST00000540935 C1orf53Q5VUE5 145 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 IQCA1Q86XH1 822 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 DGKHQ86XP1 1220 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 CHMP4CQ96CF2 233 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 RANBP17Q9H2T7 1088 aaKnown RBP17.42■□□□□ 0.38
DDX11-217ENST00000540935 ZHX1Q9UKY1 873 aaPredicted RBP17.42■□□□□ 0.38
DDX11-217ENST00000540935 PHF24Q9UPV7 400 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 MTMR7Q9Y216 660 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 LAMA4Q16363 1823 aa17.42■□□□□ 0.38
DDX11-217ENST00000540935 ICAM1P05362 532 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 PDHBP11177 359 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 ALAS1P13196 640 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 ADCYAP1R1P41586 468 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 ACVR2BQ13705 512 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 SYDE2Q5VT97 1194 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 ARMCX2Q7L311 632 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 FAM133AQ8N9E0 248 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 TSEN34Q9BSV6 310 aaKnown RBP17.41■□□□□ 0.38
DDX11-217ENST00000540935 A1CFQ9NQ94 594 aaKnown RBP17.41■□□□□ 0.38
DDX11-217ENST00000540935 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.41■□□□□ 0.38
DDX11-217ENST00000540935 CCPG1Q9ULG6 757 aa17.41■□□□□ 0.38
DDX11-217ENST00000540935 ASB14A6NK59 587 aa17.4■□□□□ 0.38
DDX11-217ENST00000540935 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
DDX11-217ENST00000540935 PGK1P00558 417 aa17.4■□□□□ 0.38
DDX11-217ENST00000540935 PDE4AP27815 886 aa17.4■□□□□ 0.38
DDX11-217ENST00000540935 GPATCH4Q5T3I0 446 aaKnown RBP17.4■□□□□ 0.38
DDX11-217ENST00000540935 RASGRP2Q7LDG7 609 aa17.4■□□□□ 0.38
DDX11-217ENST00000540935 FGD4Q96M96 766 aa17.4■□□□□ 0.38
DDX11-217ENST00000540935 LBHD1Q9BQE6 289 aaPredicted RBP17.4■□□□□ 0.38
DDX11-217ENST00000540935 UBE2OQ9C0C9 1292 aaKnown RBP17.4■□□□□ 0.38
DDX11-217ENST00000540935 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
DDX11-217ENST00000540935 NEDD4P46934 1319 aa17.4■□□□□ 0.38
DDX11-217ENST00000540935 RAD50Q92878 1312 aa17.4■□□□□ 0.38
DDX11-217ENST00000540935 ADAMTS4O75173 837 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 CNTN2Q02246 1040 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 ZNF543Q08ER8 600 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 TTBK2Q6IQ55 1244 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 CCDC144CPQ8IYA2 1237 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 TDHQ8IZJ6 230 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 RUFY2Q8WXA3 655 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 KRT23Q9C075 422 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 CNNM2Q9H8M5 875 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 SPC25Q9HBM1 224 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 GPCPD1Q9NPB8 672 aa17.39■□□□□ 0.37
DDX11-217ENST00000540935 MOXD2PA6NHM9 499 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 KDM4AO75164 1064 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 GSPT1P15170 499 aaKnown RBP17.38■□□□□ 0.37
DDX11-217ENST00000540935 SLC16A2P36021 539 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 SNAP25P60880 206 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 CCDC144BQ3MJ40 725 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 NUP133Q8WUM0 1156 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 FERMT2Q96AC1 680 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 CYP39A1Q9NYL5 469 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 FRMPD2Q68DX3 1309 aaPredicted RBP17.38■□□□□ 0.37
DDX11-217ENST00000540935 SYNRGQ9UMZ2 1314 aa17.38■□□□□ 0.37
DDX11-217ENST00000540935 A0A1W2PQ45 241 aaPredicted RBP17.37■□□□□ 0.37
DDX11-217ENST00000540935 A0A1W2PQY0 241 aa17.37■□□□□ 0.37
DDX11-217ENST00000540935 CST5P28325 142 aaPredicted RBP17.37■□□□□ 0.37
DDX11-217ENST00000540935 IRX6P78412 446 aaPredicted RBP17.37■□□□□ 0.37
DDX11-217ENST00000540935 LRIT3Q3SXY7 679 aa17.37■□□□□ 0.37
DDX11-217ENST00000540935 TRIM60Q495X7 471 aa17.37■□□□□ 0.37
DDX11-217ENST00000540935 MUM1L1Q5H9M0 696 aa17.37■□□□□ 0.37
DDX11-217ENST00000540935 PCSK9Q8NBP7 692 aaKnown RBP17.37■□□□□ 0.37
DDX11-217ENST00000540935 KLHDC9Q8NEP7 349 aa17.37■□□□□ 0.37
DDX11-217ENST00000540935 ANKS1AQ92625 1134 aa17.37■□□□□ 0.37
DDX11-217ENST00000540935 ZSCAN10Q96SZ4 725 aaPredicted RBP17.37■□□□□ 0.37
DDX11-217ENST00000540935 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
DDX11-217ENST00000540935 MCM3APO60318 1980 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms