RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 MAP4K1Q92918 833 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 C8orf76Q96K31 380 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 ZIM3Q96PE6 472 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 TRIM10Q9UDY6 481 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 PA2G4Q9UQ80 394 aaKnown RBP10.81□□□□□ -0.68
CLDN2-202ENST00000540876 A6NHS1 94 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 GOLGA6L10A6NI86 522 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 ATP6V1G1O75348 118 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 ATP1A1P05023 1023 aaKnown RBP10.81□□□□□ -0.68
CLDN2-202ENST00000540876 ALS2CLQ60I27 953 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 DEFB132Q7Z7B7 95 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 PROM2Q8N271 834 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 LINC00301Q8NCQ3 95 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 SLF1Q9BQI6 1058 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 NAA15Q9BXJ9 866 aaKnown RBP10.81□□□□□ -0.68
CLDN2-202ENST00000540876 CCNL1Q9UK58 526 aaPredicted RBP10.81□□□□□ -0.68
CLDN2-202ENST00000540876 ZBTB1Q9Y2K1 713 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 MAP3K2Q9Y2U5 619 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 PTPDC1A2A3K4 754 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 DPPA5A6NC42 116 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 POLD1P28340 1107 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 COPS6Q7L5N1 327 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 LINC00116Q8NCU8 138 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 AGAP11Q8TF27 550 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 HDAC7Q8WUI4 952 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 AIDAQ96BJ3 306 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 ITGB4P16144 1822 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 KCPQ6ZWJ8 1503 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 RBM47A0AV96 593 aaKnown RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 TEX33O43247 280 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 GLRX3O76003 335 aaKnown RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 CYP19A1P11511 503 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 ABL2P42684 1182 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 SYKP43405 635 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 EN1Q05925 392 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 CKAP4Q07065 602 aaKnown RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 TRIM68Q6AZZ1 485 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 CRELD2Q6UXH1 353 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 MAEAQ7L5Y9 396 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 CACNA2D3Q8IZS8 1091 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 XAGE3Q8WTP9 111 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 FAM163AQ96GL9 167 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 DNAAF2Q9NVR5 837 aaKnown RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 SLC5A4Q9NY91 659 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 LEMD3Q9Y2U8 911 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 C2CD2Q9Y426 696 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 LRRD1A4D1F6 860 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 LIN7AO14910 233 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 MARCKSP29966 332 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 CDC27P30260 824 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 MATR3P43243 847 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 SLC7A5Q01650 507 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 NMIQ13287 307 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 QPCTQ16769 361 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 NUGGCQ68CJ6 796 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 OTUD7BQ6GQQ9 843 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 TBC1D1Q86TI0 1168 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 CCDC63Q8NA47 563 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 KCNG4Q8TDN1 519 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 SSH3Q8TE77 659 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 RBM17Q96I25 401 aaKnown RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 SEC16BQ96JE7 1060 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 DBF4Q9UBU7 674 aaPredicted RBP10.8□□□□□ -0.68
CLDN2-202ENST00000540876 TUBE1Q9UJT0 475 aa10.8□□□□□ -0.68
CLDN2-202ENST00000540876 SIPA1L3O60292 1781 aaPredicted RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 RASSF10A6NK89 507 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 M0R2C6 588 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 ZNF185O15231 689 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 DNAJC8O75937 253 aaPredicted RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 CASP14P31944 242 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 POLE2P56282 527 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 SF3A3Q12874 501 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 ENOX2Q16206 610 aaKnown RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 CFAP58Q5T655 872 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 CCDC170Q8IYT3 715 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 ARL10Q8N8L6 244 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 NSUN7Q8NE18 718 aaKnown RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 PHACTR1Q9C0D0 580 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 SAMSN1Q9NSI8 373 aaKnown RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 GMNCA6NCL1 334 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 LUC7L3O95232 432 aaKnown RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 KIF5BP33176 963 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 CRKLP46109 303 aaKnown RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 BEND3Q5T5X7 828 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 CLASRPQ8N2M8 674 aaKnown RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 CCHCR1Q8TD31 782 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 JAKMIP2Q96AA8 810 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 RPGRIP1Q96KN7 1286 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 ZBTB3Q9H5J0 574 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 PANK4Q9NVE7 773 aa10.79□□□□□ -0.68
CLDN2-202ENST00000540876 DMGDHQ9UI17 866 aaKnown RBP10.79□□□□□ -0.68
CLDN2-202ENST00000540876 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 STXBP3O00186 592 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 N4BP3O15049 544 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 EVI5O60447 810 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 STARD3NLO95772 234 aa10.78□□□□□ -0.68
CLDN2-202ENST00000540876 TMEM62Q0P6H9 643 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms