RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 MARCKSP29966 332 aaPredicted RBP11.61□□□□□ -0.55
LMO3-224ENST00000540848 BTDP43251 543 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 SKOR1P84550 965 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 TFAP4Q01664 338 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 TTLL12Q14166 644 aaPredicted RBP11.61□□□□□ -0.55
LMO3-224ENST00000540848 GRM4Q14833 912 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 PFKFB3Q16875 520 aaPredicted RBP11.61□□□□□ -0.55
LMO3-224ENST00000540848 MFSD14BQ5SR56 506 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 SHC4Q6S5L8 630 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 C16orf86Q6ZW13 317 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 TEX11Q8IYF3 940 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 PIBF1Q8WXW3 757 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 ZNF775Q96BV0 537 aaPredicted RBP11.61□□□□□ -0.55
LMO3-224ENST00000540848 POLLQ9UGP5 575 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 KCNH3Q9ULD8 1083 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 KCNJ14Q9UNX9 436 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 C6orf229H3BNL8 230 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 IKBKBO14920 756 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 TSPY3P0CV98 308 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 TSPY8P0CW00 308 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 SRGNP10124 158 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 CYP2D6P10635 497 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 SMARCA1P28370 1054 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 TOB1P50616 345 aaPredicted RBP11.6□□□□□ -0.55
LMO3-224ENST00000540848 RCSD1Q6JBY9 416 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 RETREG3Q86VR2 466 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 PNMA1Q8ND90 353 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 TGFBRAP1Q8WUH2 860 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 EYA3Q99504 573 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 FBXO2Q9UK22 296 aaPredicted RBP11.6□□□□□ -0.55
LMO3-224ENST00000540848 PARP3Q9Y6F1 533 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
LMO3-224ENST00000540848 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 PLEKHA8P1O95397 391 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 DIXDC1Q155Q3 683 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 CT47A1Q5JQC4 288 aaPredicted RBP11.59□□□□□ -0.55
LMO3-224ENST00000540848 FAM47AQ5JRC9 791 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 KRBA2Q6ZNG9 492 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 C11orf57Q6ZUT1 292 aaPredicted RBP11.59□□□□□ -0.55
LMO3-224ENST00000540848 DHX40Q8IX18 779 aaKnown RBP11.59□□□□□ -0.55
LMO3-224ENST00000540848 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 CCDC82Q8N4S0 544 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 MPNDQ8N594 471 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
LMO3-224ENST00000540848 TRIML1Q8N9V2 468 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 CCDC148Q8NFR7 591 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 MASTLQ96GX5 879 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 ZC3H12CQ9C0D7 883 aaKnown RBP11.59□□□□□ -0.55
LMO3-224ENST00000540848 PLIN4Q96Q06 1357 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 MYH1P12882 1939 aa11.59□□□□□ -0.55
LMO3-224ENST00000540848 AP5Z1O43299 807 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 FKBP1AP62942 108 aaKnown RBP11.58□□□□□ -0.55
LMO3-224ENST00000540848 NR5A1Q13285 461 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.55
LMO3-224ENST00000540848 DRC7Q8IY82 874 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 CNNM3Q8NE01 707 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 NEDD1Q8NHV4 660 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 TNFRSF25Q93038 417 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 MRGPRX2Q96LB1 330 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 CABP5Q9NP86 173 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 VPS54Q9P1Q0 977 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 JAG2Q9Y219 1238 aa11.58□□□□□ -0.55
LMO3-224ENST00000540848 FLT1P17948 1338 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 hCG_1984214I3L0E3 225 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 SMIM22K7EJ46 135 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 SMPD1P17405 629 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 RASA1P20936 1047 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 RHBDL3P58872 404 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 NT5DC1Q5TFE4 455 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 OLFM4Q6UX06 510 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
LMO3-224ENST00000540848 PARP9Q8IXQ6 854 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 CMTR1Q8N1G2 835 aaKnown RBP11.58□□□□□ -0.56
LMO3-224ENST00000540848 ZNF713Q8N859 430 aaPredicted RBP11.58□□□□□ -0.56
LMO3-224ENST00000540848 DAGLBQ8NCG7 672 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 CCDC12Q8WUD4 166 aaPredicted RBP11.58□□□□□ -0.56
LMO3-224ENST00000540848 MRIQ9BWK5 157 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 SPZ1Q9BXG8 430 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 IL17RBQ9NRM6 502 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 SPTLC3Q9NUV7 552 aa11.58□□□□□ -0.56
LMO3-224ENST00000540848 UBE2Q2LH0YL09 131 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 TRIM66O15016 1216 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 APBA3O96018 575 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 TOP1P11387 765 aaKnown RBP11.57□□□□□ -0.56
LMO3-224ENST00000540848 NOVP48745 357 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 CDK8P49336 464 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 NLRP5P59047 1200 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 ZNF827Q17R98 1081 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 ARL6IP4Q66PJ3 421 aaKnown RBP11.57□□□□□ -0.56
LMO3-224ENST00000540848 STYK1Q6J9G0 422 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 HHIPL2Q6UWX4 724 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 DPP8Q6V1X1 898 aaPredicted RBP11.57□□□□□ -0.56
LMO3-224ENST00000540848 MAPKAPK5Q8IW41 473 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 AOPEPQ8N6M6 819 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 IMPACTQ9P2X3 320 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 CLIP2Q9UDT6 1046 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 SWAP70Q9UH65 585 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 PCDHB6Q9Y5E3 794 aa11.57□□□□□ -0.56
LMO3-224ENST00000540848 PALM3A6NDB9 673 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms