RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 RTN1Q16799 776 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 SNRNP48Q6IEG0 339 aaKnown RBP18.02■□□□□ 0.48
DDB1-218ENST00000540784 PLEKHH3Q7Z736 793 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 AGBL1Q96MI9 1066 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 KIF2CQ99661 725 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 LARP6Q9BRS8 491 aaKnown RBP18.02■□□□□ 0.48
DDB1-218ENST00000540784 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 RBM28Q9NW13 759 aaKnown RBP18.02■□□□□ 0.48
DDB1-218ENST00000540784 PNMA2Q9UL42 364 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 TRIM17Q9Y577 477 aa18.02■□□□□ 0.48
DDB1-218ENST00000540784 CCDC196A0A1B0GTZ2 297 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 GOLGA8AA7E2F4 631 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 GOLGA8BA8MQT2 603 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 ICAM1P05362 532 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 PDIA3P30101 505 aaKnown RBP18.01■□□□□ 0.47
DDB1-218ENST00000540784 METAP2P50579 478 aaKnown RBP eCLIP18.01■□□□□ 0.476e-8■□□□□ 10.7
DDB1-218ENST00000540784 CAP1Q01518 475 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 OTOP1Q7RTM1 612 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 CTU1Q7Z7A3 348 aaKnown RBP18.01■□□□□ 0.47
DDB1-218ENST00000540784 ZNF274Q96GC6 653 aaPredicted RBP18.01■□□□□ 0.47
DDB1-218ENST00000540784 TBC1D32Q96NH3 1257 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 RIOX1Q9H6W3 641 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 RIPK3Q9Y572 518 aa18.01■□□□□ 0.47
DDB1-218ENST00000540784 ZNF536O15090 1300 aa18■□□□□ 0.47
DDB1-218ENST00000540784 RLFQ13129 1914 aa18■□□□□ 0.47
DDB1-218ENST00000540784 STRNO43815 780 aa18■□□□□ 0.47
DDB1-218ENST00000540784 AK2P54819 239 aa18■□□□□ 0.47
DDB1-218ENST00000540784 CDC37Q16543 378 aaPredicted RBP18■□□□□ 0.47
DDB1-218ENST00000540784 TKFCQ3LXA3 575 aa18■□□□□ 0.47
DDB1-218ENST00000540784 GPR142Q7Z601 462 aa18■□□□□ 0.47
DDB1-218ENST00000540784 NBPF11Q86T75 865 aa18■□□□□ 0.47
DDB1-218ENST00000540784 SRBD1Q8N5C6 995 aaKnown RBP18■□□□□ 0.47
DDB1-218ENST00000540784 CCPG1Q9ULG6 757 aa18■□□□□ 0.47
DDB1-218ENST00000540784 IVNS1ABPQ9Y6Y0 642 aa18■□□□□ 0.47
DDB1-218ENST00000540784 PLEKHA8P1O95397 391 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 ALAS1P13196 640 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 PTPREP23469 700 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 ADD1P35611 737 aaKnown RBP17.99■□□□□ 0.47
DDB1-218ENST00000540784 PRMT2P55345 433 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 RABEP1Q15276 862 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 PKN2Q16513 984 aaKnown RBP17.99■□□□□ 0.47
DDB1-218ENST00000540784 TMTC3Q6ZXV5 915 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 CMTR1Q8N1G2 835 aaKnown RBP17.99■□□□□ 0.47
DDB1-218ENST00000540784 CCDC82Q8N4S0 544 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 CHST13Q8NET6 341 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 TRERF1Q96PN7 1200 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 SRRDQ9UH36 339 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 HPS5Q9UPZ3 1129 aa17.99■□□□□ 0.47
DDB1-218ENST00000540784 SLC15A5A6NIM6 579 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 ZBTB5O15062 677 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 CYTH3O43739 400 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 FCER1AP12319 257 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 CCT2P78371 535 aaKnown RBP17.98■□□□□ 0.47
DDB1-218ENST00000540784 SLC35G1Q2M3R5 365 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 QRICH1Q2TAL8 776 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 IL27Q8NEV9 243 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 PIBF1Q8WXW3 757 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 MTMR8Q96EF0 704 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 RRP36Q96EU6 259 aaKnown RBP17.98■□□□□ 0.47
DDB1-218ENST00000540784 PIGSQ96S52 555 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 HOMER2Q9NSB8 354 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 FAM217BQ9NTX9 383 aaPredicted RBP17.98■□□□□ 0.47
DDB1-218ENST00000540784 FBXO40Q9UH90 709 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 GJD2Q9UKL4 321 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 CASP8AP2Q9UKL3 1982 aa17.98■□□□□ 0.47
DDB1-218ENST00000540784 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 CDC27P30260 824 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 TRAF1Q13077 416 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 KCTD2Q14681 263 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 MMP19Q99542 508 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 RNF146Q9NTX7 359 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 TPCN1Q9ULQ1 816 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 GABRQQ9UN88 632 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 PTPN22Q9Y2R2 807 aa17.97■□□□□ 0.47
DDB1-218ENST00000540784 FLT3LGP49771 235 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 PRKCZQ05513 592 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 STK3Q13188 491 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 USH1GQ495M9 461 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 MORN1Q5T089 497 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
DDB1-218ENST00000540784 DPP9Q86TI2 863 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 ABRAQ8N0Z2 381 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 RAET1EQ8TD07 263 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 SOCS4Q8WXH5 440 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 SLKQ9H2G2 1235 aaPredicted RBP17.96■□□□□ 0.47
DDB1-218ENST00000540784 ACAD9Q9H845 621 aa17.96■□□□□ 0.47
DDB1-218ENST00000540784 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
DDB1-218ENST00000540784 V9GY48 417 aaPredicted RBP17.96■□□□□ 0.47
DDB1-218ENST00000540784 CYP2B6P20813 491 aa17.95■□□□□ 0.46
DDB1-218ENST00000540784 MAP2K5Q13163 448 aa17.95■□□□□ 0.46
DDB1-218ENST00000540784 GRB14Q14449 540 aa17.95■□□□□ 0.46
DDB1-218ENST00000540784 ANKRD35Q8N283 1001 aa17.95■□□□□ 0.46
DDB1-218ENST00000540784 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
DDB1-218ENST00000540784 LIMCH1Q9UPQ0 1083 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms