RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 NUP43Q8NFH3 380 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 BHLHE22Q8NFJ8 381 aaPredicted RBP6.08□□□□□ -1.44
MDM2-227ENST00000540709 ZSCAN18Q8TBC5 510 aaPredicted RBP6.08□□□□□ -1.44
MDM2-227ENST00000540709 SMARCC1Q92922 1105 aaPredicted RBP6.08□□□□□ -1.44
MDM2-227ENST00000540709 MCOLN1Q9GZU1 580 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 ERVK13-1Q9NX77 482 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 ZNF214Q9UL59 606 aaPredicted RBP6.08□□□□□ -1.44
MDM2-227ENST00000540709 SMG5Q9UPR3 1016 aaKnown RBP6.08□□□□□ -1.44
MDM2-227ENST00000540709 MYOCOSA0A1B0GUC4 107 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 WTIPA6NIX2 430 aaPredicted RBP6.07□□□□□ -1.44
MDM2-227ENST00000540709 FADS2P1A8MWK0 482 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 KRT1P04264 644 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 ENDOUP21128 410 aaKnown RBP6.07□□□□□ -1.44
MDM2-227ENST00000540709 NOP2P46087 812 aaKnown RBP6.07□□□□□ -1.44
MDM2-227ENST00000540709 SOX9P48436 509 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 SRSF3P84103 164 aaKnown RBP6.07□□□□□ -1.44
MDM2-227ENST00000540709 KCNA10Q16322 511 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 HSF5Q4G112 596 aaPredicted RBP6.07□□□□□ -1.44
MDM2-227ENST00000540709 HEATR6Q6AI08 1181 aaKnown RBP6.07□□□□□ -1.44
MDM2-227ENST00000540709 JAMLQ86YT9 394 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 ANAPC16Q96DE5 110 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 FGD4Q96M96 766 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 ZNF552Q9H707 407 aaPredicted RBP6.07□□□□□ -1.44
MDM2-227ENST00000540709 SIRT5Q9NXA8 310 aa6.07□□□□□ -1.44
MDM2-227ENST00000540709 CCDC9Q9Y3X0 531 aaKnown RBP6.07□□□□□ -1.44
MDM2-227ENST00000540709 A0A1W2PQH9 124 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 A0A1W2PQJ5 194 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 ARL4AP40617 200 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 GIPRP48546 466 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 DLG4P78352 724 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 CYP4F8P98187 520 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 SLC7A5Q01650 507 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 RTP2Q5QGT7 225 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 CIAPIN1Q6FI81 312 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 HAUS7Q99871 368 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 SLC12A9Q9BXP2 914 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 TGIF2Q9GZN2 237 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 PRR13Q9NZ81 148 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 SUGT1Q9Y2Z0 365 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 SF3B6Q9Y3B4 125 aaKnown RBP6.06□□□□□ -1.44
MDM2-227ENST00000540709 SLC12A7Q9Y666 1083 aa6.06□□□□□ -1.44
MDM2-227ENST00000540709 NUDT19A8MXV4 375 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 NUAK1O60285 661 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 PNLIPP16233 465 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 POU4F1Q01851 419 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 DPY19L1Q2PZI1 675 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 RASGRP4Q8TDF6 673 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 JMJD8Q96S16 334 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 IRF2BPLQ9H1B7 796 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 CRTAC1Q9NQ79 661 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 IMPACTQ9P2X3 320 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 FHOD1Q9Y613 1164 aa6.05□□□□□ -1.44
MDM2-227ENST00000540709 CBFA2T2O43439 604 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 VAMP4O75379 141 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 MPOP05164 745 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 ZSCAN22P10073 491 aaPredicted RBP6.04□□□□□ -1.44
MDM2-227ENST00000540709 IFNGR1P15260 489 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 GLDCP23378 1020 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 ERCC5P28715 1186 aaPredicted RBP6.04□□□□□ -1.44
MDM2-227ENST00000540709 GJA8P48165 433 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 RAB3GAP1Q15042 981 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 HLA-DQA1Q5Y7H0 255 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 KIAA1211LQ6NV74 962 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 TMEM52Q8NDY8 209 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 OR6P1Q8NGX9 317 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 PPP1R14AQ96A00 147 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 ZNF428Q96B54 188 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 FCRL3Q96P31 734 aaPredicted RBP6.04□□□□□ -1.44
MDM2-227ENST00000540709 GBP3Q9H0R5 595 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 PHAXQ9H814 394 aaKnown RBP6.04□□□□□ -1.44
MDM2-227ENST00000540709 CNOT6Q9ULM6 557 aaKnown RBP6.04□□□□□ -1.44
MDM2-227ENST00000540709 MRVI1Q9Y6F6 885 aa6.04□□□□□ -1.44
MDM2-227ENST00000540709 TEX51A0A1B0GUA7 166 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 A0A1W2PQ45 241 aaPredicted RBP6.03□□□□□ -1.44
MDM2-227ENST00000540709 A0A1W2PQY0 241 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 PEX10O60683 326 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 PPM1BO75688 479 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 EPHX1P07099 455 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 LINC00310P59036 64 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 SLCO6A1Q86UG4 719 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 SHDQ96IW2 340 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 SEC16BQ96JE7 1060 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 CAPN10Q9HC96 672 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 CD320Q9NPF0 282 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 WHRNQ9P202 907 aa6.03□□□□□ -1.44
MDM2-227ENST00000540709 DIS3Q9Y2L1 958 aaKnown RBP6.03□□□□□ -1.44
MDM2-227ENST00000540709 STXBP3O00186 592 aa6.02□□□□□ -1.45
MDM2-227ENST00000540709 SEMA7AO75326 666 aa6.02□□□□□ -1.45
MDM2-227ENST00000540709 MED14OSP0DP75 135 aa6.02□□□□□ -1.45
MDM2-227ENST00000540709 VIPR1P32241 457 aa6.02□□□□□ -1.45
MDM2-227ENST00000540709 LAPTM5Q13571 262 aa6.02□□□□□ -1.45
MDM2-227ENST00000540709 VHLLQ6RSH7 139 aa6.02□□□□□ -1.45
MDM2-227ENST00000540709 VPS37DQ86XT2 251 aa6.02□□□□□ -1.45
MDM2-227ENST00000540709 FAM169BQ8N8A8 192 aa6.02□□□□□ -1.45
MDM2-227ENST00000540709 A0A087WZG4 1122 aa6.01□□□□□ -1.45
MDM2-227ENST00000540709 FGF10O15520 208 aaPredicted RBP6.01□□□□□ -1.45
MDM2-227ENST00000540709 TBC1D8O95759 1140 aa6.01□□□□□ -1.45
MDM2-227ENST00000540709 SSBP05455 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms