RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
MDM1-210ENST00000540418 TRIM17Q9Y577 477 aa17.37■□□□□ 0.37
MDM1-210ENST00000540418 DHX16O60231 1041 aaKnown RBP17.36■□□□□ 0.37
MDM1-210ENST00000540418 ERCC3P19447 782 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 SMARCA1P28370 1054 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 NCAPG2Q86XI2 1143 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 RIOX1Q9H6W3 641 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
MDM1-210ENST00000540418 ICAM1P05362 532 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 PPP2R5BQ15173 497 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 GPR142Q7Z601 462 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 PLEKHH3Q7Z736 793 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 AGBL1Q96MI9 1066 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 TBC1D32Q96NH3 1257 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 RBM28Q9NW13 759 aaKnown RBP17.36■□□□□ 0.37
MDM1-210ENST00000540418 PNMA2Q9UL42 364 aa17.36■□□□□ 0.37
MDM1-210ENST00000540418 ANKRD1Q15327 319 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 WDR78Q5VTH9 848 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 NBPF11Q86T75 865 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 RIPK3Q9Y572 518 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 GOLGA8BA8MQT2 603 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 SLC4A3P48751 1232 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 PRMT2P55345 433 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 RTN1Q16799 776 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 MTMR8Q96EF0 704 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 ZNF274Q96GC6 653 aaPredicted RBP17.35■□□□□ 0.37
MDM1-210ENST00000540418 SRRDQ9UH36 339 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 HPS5Q9UPZ3 1129 aa17.35■□□□□ 0.37
MDM1-210ENST00000540418 CYTH3O43739 400 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 STRNO43815 780 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 PDIA3P30101 505 aaKnown RBP17.34■□□□□ 0.37
MDM1-210ENST00000540418 PKN2Q16513 984 aaKnown RBP17.34■□□□□ 0.37
MDM1-210ENST00000540418 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
MDM1-210ENST00000540418 SLC35G1Q2M3R5 365 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 TKFCQ3LXA3 575 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
MDM1-210ENST00000540418 SPZ1Q9BXG8 430 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 CCPG1Q9ULG6 757 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 PLEKHA8P1O95397 391 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 PTPREP23469 700 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 METAP2P50579 478 aaKnown RBP eCLIP17.34■□□□□ 0.37
MDM1-210ENST00000540418 LARP6Q9BRS8 491 aaKnown RBP17.34■□□□□ 0.37
MDM1-210ENST00000540418 GJD2Q9UKL4 321 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 IVNS1ABPQ9Y6Y0 642 aa17.34■□□□□ 0.37
MDM1-210ENST00000540418 CCDC196A0A1B0GTZ2 297 aa17.33■□□□□ 0.36
MDM1-210ENST00000540418 AK2P54819 239 aa17.33■□□□□ 0.36
MDM1-210ENST00000540418 TMTC3Q6ZXV5 915 aa17.33■□□□□ 0.36
MDM1-210ENST00000540418 CHST13Q8NET6 341 aa17.33■□□□□ 0.36
MDM1-210ENST00000540418 FAM217BQ9NTX9 383 aaPredicted RBP17.33■□□□□ 0.36
MDM1-210ENST00000540418 SLC15A5A6NIM6 579 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 FBXO40Q9UH90 709 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 GABRQQ9UN88 632 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 ZBTB5O15062 677 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 FCER1AP12319 257 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 ALAS1P13196 640 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 CDC27P30260 824 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 PRKCZQ05513 592 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 MORN1Q5T089 497 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 ABRAQ8N0Z2 381 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 CMTR1Q8N1G2 835 aaKnown RBP17.32■□□□□ 0.36
MDM1-210ENST00000540418 TRERF1Q96PN7 1200 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 NUDT12Q9BQG2 462 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 PTPN22Q9Y2R2 807 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 NID2Q14112 1375 aa17.32■□□□□ 0.36
MDM1-210ENST00000540418 RABEP1Q15276 862 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 FBXO11Q86XK2 927 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 IL27Q8NEV9 243 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 SOCS4Q8WXH5 440 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 PIGSQ96S52 555 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 COL11A1P12107 1806 aaPredicted RBP17.31■□□□□ 0.36
MDM1-210ENST00000540418 PNMA6FA0A0J9YX94 578 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 ADD1P35611 737 aaKnown RBP17.31■□□□□ 0.36
MDM1-210ENST00000540418 FLT3LGP49771 235 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 GRB14Q14449 540 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 COL13A1Q5TAT6 717 aaPredicted RBP17.31■□□□□ 0.36
MDM1-210ENST00000540418 CCDC82Q8N4S0 544 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
MDM1-210ENST00000540418 MMP19Q99542 508 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 HOMER2Q9NSB8 354 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 RNF146Q9NTX7 359 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 TPCN1Q9ULQ1 816 aa17.31■□□□□ 0.36
MDM1-210ENST00000540418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.3■□□□□ 0.36
MDM1-210ENST00000540418 HOMER1Q86YM7 354 aa17.3■□□□□ 0.36
MDM1-210ENST00000540418 USP6NLQ92738 828 aa17.3■□□□□ 0.36
MDM1-210ENST00000540418 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
MDM1-210ENST00000540418 ACAD9Q9H845 621 aa17.3■□□□□ 0.36
MDM1-210ENST00000540418 CCT2P78371 535 aaKnown RBP17.3■□□□□ 0.36
MDM1-210ENST00000540418 KCTD2Q14681 263 aa17.3■□□□□ 0.36
MDM1-210ENST00000540418 FBXO46Q6PJ61 603 aaPredicted RBP17.3■□□□□ 0.36
MDM1-210ENST00000540418 ZSWIM8A7E2V4 1837 aa17.3■□□□□ 0.36
MDM1-210ENST00000540418 FUT2Q10981 343 aa17.29■□□□□ 0.36
MDM1-210ENST00000540418 TRAF1Q13077 416 aa17.29■□□□□ 0.36
MDM1-210ENST00000540418 MAP2K5Q13163 448 aa17.29■□□□□ 0.36
MDM1-210ENST00000540418 IRF5Q13568 498 aa17.29■□□□□ 0.36
MDM1-210ENST00000540418 USH1GQ495M9 461 aa17.29■□□□□ 0.36
MDM1-210ENST00000540418 RAET1EQ8TD07 263 aa17.29■□□□□ 0.36
MDM1-210ENST00000540418 PIBF1Q8WXW3 757 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms