RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 SMARCA5O60264 1052 aaPredicted RBP23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 OAZ1P54368 228 aa23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 NKX3-2P78367 333 aa23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 GNASQ5JWF2 1037 aa23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 ZNF444Q8N0Y2 327 aaPredicted RBP23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 KBTBD3Q8NAB2 608 aa23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 KATNBL1Q9H079 304 aa23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 ECHDC1Q9NTX5 307 aa23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 MTMR4Q9NYA4 1195 aa23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 GREB1LQ9C091 1923 aaPredicted RBP23.84■■□□□ 1.41
LPCAT3-210ENST00000540090 A0A0U1RQG5 324 aaPredicted RBP23.83■■□□□ 1.41
LPCAT3-210ENST00000540090 ARMCX2Q7L311 632 aa23.83■■□□□ 1.41
LPCAT3-210ENST00000540090 TMEM199Q8N511 208 aa23.83■■□□□ 1.41
LPCAT3-210ENST00000540090 APPBP2Q92624 585 aa23.83■■□□□ 1.41
LPCAT3-210ENST00000540090 CEP95Q96GE4 821 aa23.83■■□□□ 1.41
LPCAT3-210ENST00000540090 ZNF287Q9HBT7 754 aa23.83■■□□□ 1.41
LPCAT3-210ENST00000540090 CTAGE5O15320 804 aa23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 CSF2RAP15509 400 aa23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 TJAP1Q5JTD0 557 aa23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 FAM126BQ8IXS8 530 aa23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 CCDC144CPQ8IYA2 1237 aa23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 MIER1Q8N108 512 aa23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 GMCL1P1Q8NEA9 526 aa23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 PBX4Q9BYU1 374 aa23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 EPB41L4AQ9HCS5 686 aaPredicted RBP23.82■■□□□ 1.4
LPCAT3-210ENST00000540090 TTLL1O95922 423 aa23.81■■□□□ 1.4
LPCAT3-210ENST00000540090 FDX1P10109 184 aa23.81■■□□□ 1.4
LPCAT3-210ENST00000540090 PBX2P40425 430 aa23.81■■□□□ 1.4
LPCAT3-210ENST00000540090 GRXCR1A8MXD5 290 aa23.8■■□□□ 1.4
LPCAT3-210ENST00000540090 RNF113AO15541 343 aaKnown RBP23.8■■□□□ 1.4
LPCAT3-210ENST00000540090 GPAA1O43292 621 aa23.8■■□□□ 1.4
LPCAT3-210ENST00000540090 PRDM1O75626 825 aa23.8■■□□□ 1.4
LPCAT3-210ENST00000540090 CD4P01730 458 aa23.8■■□□□ 1.4
LPCAT3-210ENST00000540090 GNAT2P19087 354 aa23.8■■□□□ 1.4
LPCAT3-210ENST00000540090 ZNF365Q70YC5 407 aa23.8■■□□□ 1.4
LPCAT3-210ENST00000540090 FAM133AQ8N9E0 248 aa23.8■■□□□ 1.4
LPCAT3-210ENST00000540090 TLR3O15455 904 aaKnown RBP23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 ZFYP08048 801 aaPredicted RBP23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 ACRP10323 421 aa23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 BMP3P12645 472 aa23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 TDO2P48775 406 aa23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 SLFN13Q68D06 897 aa23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 PSRC1Q6PGN9 363 aaPredicted RBP23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 CCDC129Q6ZRS4 1044 aa23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 LRRC47Q8N1G4 583 aaKnown RBP23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 PPP1R12CQ9BZL4 782 aa23.79■■□□□ 1.4
LPCAT3-210ENST00000540090 MYH7P12883 1935 aa23.78■■□□□ 1.4
LPCAT3-210ENST00000540090 PATL2C9JE40 543 aaKnown RBP23.78■■□□□ 1.4
LPCAT3-210ENST00000540090 CNTN2Q02246 1040 aa23.78■■□□□ 1.4
LPCAT3-210ENST00000540090 SLC43A3Q8NBI5 491 aa23.78■■□□□ 1.4
LPCAT3-210ENST00000540090 NEDD1Q8NHV4 660 aa23.78■■□□□ 1.4
LPCAT3-210ENST00000540090 GAS2L1Q99501 681 aaPredicted RBP23.78■■□□□ 1.4
LPCAT3-210ENST00000540090 APPP05067 770 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 BEX3Q00994 111 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 TNFAIP2Q03169 654 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 AKNAD1Q5T1N1 836 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 IFNL3Q8IZI9 196 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 HERVK_113Q902F9 699 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 ACAD9Q9H845 621 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 IL23AQ9NPF7 189 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 HOMER2Q9NSB8 354 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 GNEQ9Y223 722 aaKnown RBP23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 ASTN1O14525 1302 aa23.77■■□□□ 1.4
LPCAT3-210ENST00000540090 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.76■■□□□ 1.39
LPCAT3-210ENST00000540090 SOWAHBA6NEL2 793 aa23.76■■□□□ 1.39
LPCAT3-210ENST00000540090 TMEM232C9JQI7 657 aa23.76■■□□□ 1.39
LPCAT3-210ENST00000540090 M0R2C6 588 aa23.76■■□□□ 1.39
LPCAT3-210ENST00000540090 CYP2C18P33260 490 aa23.76■■□□□ 1.39
LPCAT3-210ENST00000540090 CHURC1Q8WUH1 139 aa23.76■■□□□ 1.39
LPCAT3-210ENST00000540090 PRDM12Q9H4Q4 367 aa23.76■■□□□ 1.39
LPCAT3-210ENST00000540090 A1CFQ9NQ94 594 aaKnown RBP23.76■■□□□ 1.39
LPCAT3-210ENST00000540090 ASB14A6NK59 587 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 CABYRO75952 493 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 TSPY3P0CV98 308 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 TSPY8P0CW00 308 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 STAT2P52630 851 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 CXCL17Q6UXB2 119 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 NOL8Q76FK4 1167 aaKnown RBP23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 FAM160B2Q86V87 743 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 STAG1Q8WVM7 1258 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 ATXN2LQ8WWM7 1075 aaKnown RBP23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 GPATCH3Q96I76 525 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 AGBL1Q96MI9 1066 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 ZNF536O15090 1300 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 PLIN4Q96Q06 1357 aa23.75■■□□□ 1.39
LPCAT3-210ENST00000540090 TNFRSF10AO00220 468 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 PDE4BQ07343 736 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 RAB30Q15771 203 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 TKFCQ3LXA3 575 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 TSHZ3Q63HK5 1081 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 GMCL1Q96IK5 515 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 SEZ6LQ9BYH1 1024 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 DCTPP1Q9H773 170 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 RNF146Q9NTX7 359 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 CXXC1Q9P0U4 656 aaPredicted RBP23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 MSRAQ9UJ68 235 aa23.74■■□□□ 1.39
LPCAT3-210ENST00000540090 PLA2G6O60733 806 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 FGBP02675 491 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 TFAP4Q01664 338 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 ITGA7Q13683 1181 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms