RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 TRIM55Q9BYV6 548 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 PCMTD2Q9NV79 361 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 KCNH3Q9ULD8 1083 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 SNX11Q9Y5W9 270 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 SLC12A7Q9Y666 1083 aa7.79□□□□□ -1.16
MRE11-209ENST00000540013 NUP153P49790 1475 aaKnown RBP7.79□□□□□ -1.16
MRE11-209ENST00000540013 TNFRSF10CO14798 259 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 DNAJA2O60884 412 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 CLCN7P51798 805 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 GYS2P54840 703 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 OXCT1P55809 520 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 RAB33AQ14088 237 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 MSMPQ1L6U9 139 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 ANKS3Q6ZW76 656 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 DTX1Q86Y01 620 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 PIWIL2Q8TC59 973 aaKnown RBP7.78□□□□□ -1.16
MRE11-209ENST00000540013 SH3TC2Q8TF17 1288 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 DHRS1Q96LJ7 313 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 KIF2CQ99661 725 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
MRE11-209ENST00000540013 TCEAL9Q9UHQ7 104 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 EID1Q9Y6B2 187 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 COMMD10Q9Y6G5 202 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 COL17A1Q9UMD9 1497 aaPredicted RBP7.78□□□□□ -1.16
MRE11-209ENST00000540013 ABCA9Q8IUA7 1624 aa7.78□□□□□ -1.16
MRE11-209ENST00000540013 A0A0U1RQG5 324 aaPredicted RBP7.77□□□□□ -1.17
MRE11-209ENST00000540013 FAM155AB1AL88 458 aaPredicted RBP7.77□□□□□ -1.17
MRE11-209ENST00000540013 KLF4O43474 513 aa7.77□□□□□ -1.17
MRE11-209ENST00000540013 SSTR4P31391 388 aa7.77□□□□□ -1.17
MRE11-209ENST00000540013 HOMER1Q86YM7 354 aa7.77□□□□□ -1.17
MRE11-209ENST00000540013 RIN3Q8TB24 985 aa7.77□□□□□ -1.17
MRE11-209ENST00000540013 PPP1R13LQ8WUF5 828 aa7.77□□□□□ -1.17
MRE11-209ENST00000540013 HOMER2Q9NSB8 354 aa7.77□□□□□ -1.17
MRE11-209ENST00000540013 ANGEL1Q9UNK9 670 aaKnown RBP7.77□□□□□ -1.17
MRE11-209ENST00000540013 THRAP3Q9Y2W1 955 aaKnown RBP7.77□□□□□ -1.17
MRE11-209ENST00000540013 KIF3BO15066 747 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 PRNPP04156 253 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 GUCY2CP25092 1073 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 HOXA10P31260 410 aaPredicted RBP7.76□□□□□ -1.17
MRE11-209ENST00000540013 GIPRP48546 466 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 MASP1P48740 699 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 CLEC4GQ6UXB4 293 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 C11orf96Q7Z7L8 435 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 C19orf47Q8N9M1 422 aaKnown RBP7.76□□□□□ -1.17
MRE11-209ENST00000540013 FAM181AQ8N9Y4 354 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 BAHD1Q8TBE0 780 aaPredicted RBP7.76□□□□□ -1.17
MRE11-209ENST00000540013 GNL3LQ9NVN8 582 aaKnown RBP7.76□□□□□ -1.17
MRE11-209ENST00000540013 PNMA2Q9UL42 364 aa7.76□□□□□ -1.17
MRE11-209ENST00000540013 FAM221BA6H8Z2 402 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 CLEC3AO75596 197 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 ITIH2P19823 946 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 SPINK2P20155 84 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 MAP9Q49MG5 647 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 ARTNQ5T4W7 220 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 CCDC81Q6ZN84 652 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 LSRQ86X29 649 aaPredicted RBP7.75□□□□□ -1.17
MRE11-209ENST00000540013 HRASLS5Q96KN8 279 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 FBXL18Q96ME1 805 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 KREMEN1Q96MU8 473 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 TNKS2Q9H2K2 1166 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 VAV3Q9UKW4 847 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 ARHGAP35Q9NRY4 1499 aa7.75□□□□□ -1.17
MRE11-209ENST00000540013 PLIN1O60240 522 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 CBX7O95931 251 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 PTMSP20962 102 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 EXOSC10Q01780 885 aaKnown RBP7.74□□□□□ -1.17
MRE11-209ENST00000540013 PRKCQQ04759 706 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 OS9Q13438 667 aaPredicted RBP7.74□□□□□ -1.17
MRE11-209ENST00000540013 BBS9Q3SYG4 887 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 PLD6Q8N2A8 252 aaKnown RBP7.74□□□□□ -1.17
MRE11-209ENST00000540013 ASB11Q8WXH4 323 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 SCYL1Q96KG9 808 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 FEZ1Q99689 392 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 TRIT1Q9H3H1 467 aaKnown RBP7.74□□□□□ -1.17
MRE11-209ENST00000540013 ANTXR1Q9H6X2 564 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 KANSL2Q9H9L4 492 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 ZFP64Q9NPA5 681 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 SLC5A6Q9Y289 635 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 CAPN6Q9Y6Q1 641 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 FMN1Q68DA7 1419 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 HECW1Q76N89 1606 aa7.74□□□□□ -1.17
MRE11-209ENST00000540013 ESYT3A0FGR9 886 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 UBOX5O94941 541 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 ETFBP38117 255 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 GNALP38405 381 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 TNNI3KQ59H18 835 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 C16orf86Q6ZW13 317 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 THAP5Q7Z6K1 395 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 SPACA3Q8IXA5 215 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 SMARCC1Q92922 1105 aaPredicted RBP7.73□□□□□ -1.17
MRE11-209ENST00000540013 SHDQ96IW2 340 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 CDK13Q14004 1512 aaKnown RBP7.73□□□□□ -1.17
MRE11-209ENST00000540013 ARAP3Q8WWN8 1544 aa7.73□□□□□ -1.17
MRE11-209ENST00000540013 PHLDB1Q86UU1 1377 aa7.72□□□□□ -1.17
MRE11-209ENST00000540013 HYAL3O43820 417 aaPredicted RBP7.72□□□□□ -1.17
MRE11-209ENST00000540013 WDHD1O75717 1129 aaPredicted RBP7.72□□□□□ -1.17
MRE11-209ENST00000540013 WNT11O96014 354 aa7.72□□□□□ -1.17
MRE11-209ENST00000540013 EVA1CP58658 441 aa7.72□□□□□ -1.17
MRE11-209ENST00000540013 HDAC1Q13547 482 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms