RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 BICD2Q8TD16 824 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 TANGO6Q9C0B7 1094 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 KIAA1683Q9H0B3 1180 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 ZNF408Q9H9D4 720 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 C6orf50Q9HD87 102 aa11.86□□□□□ -0.51
PABPC1P4-201ENST00000539977 M0R2N6 131 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 MBD3O95983 291 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 BACE1P56817 501 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 SLC39A14Q15043 492 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 PTPAQ15257 358 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 INF2Q27J81 1249 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 RILPL1Q5EBL4 403 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 BTNL9Q6UXG8 535 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 CCDC12Q8WUD4 166 aaPredicted RBP11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 CLIC6Q96NY7 704 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 SNCAIPQ9Y6H5 919 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 TCHHQ07283 1943 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 MYH4Q9Y623 1939 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 CCDC194A0A1B0GVG4 234 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 YEATS4O95619 227 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 VCAM1P19320 739 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 ADCY7P51828 1080 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 FBXO11Q86XK2 927 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 KCNG4Q8TDN1 519 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 CHURC1Q8WUH1 139 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 WDR18Q9BV38 432 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 GOLPH3LQ9H4A5 285 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 ELP3Q9H9T3 547 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L15C9J2P7 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L13C9JLJ4 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L11C9JVI0 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L18D6R9N7 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L22D6RA61 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L17D6RBQ6 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L19D6RCP7 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L20D6RJB6 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 GNA11P29992 359 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 MCM7P33993 719 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 GRIN1Q05586 938 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L24Q0WX57 530 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 SPECC1Q5M775 1068 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 CCAR1Q8IX12 1150 aaKnown RBP11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 REXO1Q8N1G1 1221 aaKnown RBP11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 DAGLBQ8NCG7 672 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 PSTPIP2Q9H939 334 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 AS3MTQ9HBK9 375 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 FEM1BQ9UK73 627 aa11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 POLR2AP24928 1970 aaKnown RBP11.84□□□□□ -0.51
PABPC1P4-201ENST00000539977 NR1I2O75469 434 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 FLOT1O75955 427 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 NF2P35240 595 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 IREB2P48200 963 aaKnown RBP11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 NOL9Q5SY16 702 aaKnown RBP11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 GALNT17Q6IS24 598 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 LPAR1Q92633 364 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 AMNQ9BXJ7 453 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 RIC8AQ9NPQ8 531 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 DACT1Q9NYF0 836 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 NOL7Q9UMY1 257 aaKnown RBP11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 AFG3L2Q9Y4W6 797 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 CSADQ9Y600 493 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 hCG_1984214I3L0E3 225 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 WDR46O15213 610 aaKnown RBP11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 CAMK4Q16566 473 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 ZSCAN23Q3MJ62 389 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 AXDND1Q5T1B0 1012 aaPredicted RBP11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 ZNF713Q8N859 430 aaPredicted RBP11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 FSIP1Q8NA03 581 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 WNK4Q96J92 1243 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 SLF1Q9BQI6 1058 aa11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.83□□□□□ -0.52
PABPC1P4-201ENST00000539977 ESYT2A0FGR8 921 aa11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 USP14P54578 494 aa11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 LETM2Q2VYF4 491 aa11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 FAM160B2Q86V87 743 aa11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 CPXCR1Q8N123 301 aa11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 TBCKQ8TEA7 893 aa11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 TBC1D5Q92609 795 aa11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 CUL5Q93034 780 aa11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 RANBP17Q9H2T7 1088 aaKnown RBP11.82□□□□□ -0.52
PABPC1P4-201ENST00000539977 MYH6P13533 1939 aa11.81□□□□□ -0.52
PABPC1P4-201ENST00000539977 SYCE3A1L190 88 aa11.81□□□□□ -0.52
PABPC1P4-201ENST00000539977 OPLAHO14841 1288 aa11.81□□□□□ -0.52
PABPC1P4-201ENST00000539977 IRF6O14896 467 aa11.81□□□□□ -0.52
PABPC1P4-201ENST00000539977 HOXA13P31271 388 aaPredicted RBP11.81□□□□□ -0.52
PABPC1P4-201ENST00000539977 MRPL12P52815 198 aaKnown RBP11.81□□□□□ -0.52
PABPC1P4-201ENST00000539977 PTGDRQ13258 359 aa11.81□□□□□ -0.52
PABPC1P4-201ENST00000539977 GSE1Q14687 1217 aa11.81□□□□□ -0.52
PABPC1P4-201ENST00000539977 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms