RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SALL3Q9BXA9 1300 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 SYNRGQ9UMZ2 1314 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 ASB14A6NK59 587 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 PQBP1O60828 265 aaKnown RBP18.07■□□□□ 0.48
UBE3B-211ENST00000539843 C6orf222P0C671 652 aaPredicted RBP18.07■□□□□ 0.48
UBE3B-211ENST00000539843 RAG1P15918 1043 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 TLE2Q04725 743 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 RCSD1Q6JBY9 416 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 ARMCX2Q7L311 632 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 DCAF4Q8WV16 495 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 VTI1AQ96AJ9 217 aa18.07■□□□□ 0.48
UBE3B-211ENST00000539843 ORC4O43929 436 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 ADAMTS4O75173 837 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 SNAI1O95863 264 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-211ENST00000539843 ALAS1P13196 640 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 ACLYP53396 1101 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 ALX1Q15699 326 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 RRP12Q5JTH9 1297 aaKnown RBP18.06■□□□□ 0.48
UBE3B-211ENST00000539843 ZNF697Q5TEC3 545 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 KCTD1Q719H9 257 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 NOL8Q76FK4 1167 aaKnown RBP18.06■□□□□ 0.48
UBE3B-211ENST00000539843 BADQ92934 168 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 TRERF1Q96PN7 1200 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 TMEM39AQ9NV64 488 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 PNMA2Q9UL42 364 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 MTMR7Q9Y216 660 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 STXBP5LQ9Y2K9 1186 aa18.06■□□□□ 0.48
UBE3B-211ENST00000539843 PLXNA1Q9UIW2 1896 aa18.05■□□□□ 0.48
UBE3B-211ENST00000539843 PCP11498 1178 aaKnown RBP18.05■□□□□ 0.48
UBE3B-211ENST00000539843 CCDC174Q6PII3 467 aa18.05■□□□□ 0.48
UBE3B-211ENST00000539843 Q7L0L9 218 aa18.05■□□□□ 0.48
UBE3B-211ENST00000539843 RILPL2Q969X0 211 aa18.05■□□□□ 0.48
UBE3B-211ENST00000539843 LENG1Q96BZ8 264 aaPredicted RBP18.05■□□□□ 0.48
UBE3B-211ENST00000539843 TOX2Q96NM4 488 aa18.05■□□□□ 0.48
UBE3B-211ENST00000539843 RNF41Q9H4P4 317 aaPredicted RBP18.05■□□□□ 0.48
UBE3B-211ENST00000539843 CCPG1Q9ULG6 757 aa18.05■□□□□ 0.48
UBE3B-211ENST00000539843 ZNFX1Q9P2E3 1918 aaKnown RBP18.05■□□□□ 0.48
UBE3B-211ENST00000539843 ELP1O95163 1332 aa18.04■□□□□ 0.48
UBE3B-211ENST00000539843 ZMYM6O95789 1325 aa18.04■□□□□ 0.48
UBE3B-211ENST00000539843 TOP1P11387 765 aaKnown RBP18.04■□□□□ 0.48
UBE3B-211ENST00000539843 CST5P28325 142 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-211ENST00000539843 KCNA10Q16322 511 aa18.04■□□□□ 0.48
UBE3B-211ENST00000539843 CCDC144BQ3MJ40 725 aa18.04■□□□□ 0.48
UBE3B-211ENST00000539843 VPS53Q5VIR6 699 aa18.04■□□□□ 0.48
UBE3B-211ENST00000539843 FAM109BQ6ICB4 259 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-211ENST00000539843 CCDC144CPQ8IYA2 1237 aa18.04■□□□□ 0.48
UBE3B-211ENST00000539843 CHMP4CQ96CF2 233 aa18.04■□□□□ 0.48
UBE3B-211ENST00000539843 YTHDC1Q96MU7 727 aaKnown RBP18.04■□□□□ 0.48
UBE3B-211ENST00000539843 MPHOSPH6Q99547 160 aaKnown RBP18.04■□□□□ 0.48
UBE3B-211ENST00000539843 LNPKQ9C0E8 428 aa18.04■□□□□ 0.48
UBE3B-211ENST00000539843 CCDC171Q6TFL3 1326 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 TLR3O15455 904 aaKnown RBP18.03■□□□□ 0.48
UBE3B-211ENST00000539843 ZEB2O60315 1214 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 NT5C2P49902 561 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 GNASQ5JWF2 1037 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 MFSD6Q6ZSS7 791 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 KLHDC9Q8NEP7 349 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 AGBL1Q96MI9 1066 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 A1CFQ9NQ94 594 aaKnown RBP18.03■□□□□ 0.48
UBE3B-211ENST00000539843 MTMR10Q9NXD2 777 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 ADD3Q9UEY8 706 aaKnown RBP18.03■□□□□ 0.48
UBE3B-211ENST00000539843 PRR12Q9ULL5 1215 aa18.03■□□□□ 0.48
UBE3B-211ENST00000539843 A0A0D9SFI3 127 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 A0A0U1RQG5 324 aaPredicted RBP18.02■□□□□ 0.48
UBE3B-211ENST00000539843 TRIM43BA6NCK2 446 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 KIAA0355O15063 1070 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 NMT2O60551 498 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 FGAP02671 866 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 HSPD1P10809 573 aaKnown RBP18.02■□□□□ 0.48
UBE3B-211ENST00000539843 GJA9P57773 515 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 TNFAIP2Q03169 654 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 FPGSQ05932 587 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 NSMFQ6X4W1 530 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 ANKRD33Q7Z3H0 272 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 FAM133AQ8N9E0 248 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 TRIM43Q96BQ3 446 aaPredicted RBP18.02■□□□□ 0.48
UBE3B-211ENST00000539843 FAM227BQ96M60 508 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 AP5M1Q9H0R1 490 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 IL17RBQ9NRM6 502 aa18.02■□□□□ 0.48
UBE3B-211ENST00000539843 HIP1O00291 1037 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 FOXP2O15409 715 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 CABYRO75952 493 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 ICAM1P05362 532 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 ASGR1P07306 291 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 FGRP09769 529 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 CNTN2Q02246 1040 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 NMIQ13287 307 aaPredicted RBP18.01■□□□□ 0.47
UBE3B-211ENST00000539843 SHHQ15465 462 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 B4GALNT3Q6L9W6 998 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 SH3RF1Q7Z6J0 888 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 ESR2Q92731 530 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 RNPC3Q96LT9 517 aaKnown RBP18.01■□□□□ 0.47
UBE3B-211ENST00000539843 UPF3AQ9H1J1 476 aaKnown RBP18.01■□□□□ 0.47
UBE3B-211ENST00000539843 DIAPH3Q9NSV4 1193 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 TCP11L1Q9NUJ3 509 aa18.01■□□□□ 0.47
UBE3B-211ENST00000539843 ZNF536O15090 1300 aa18■□□□□ 0.47
UBE3B-211ENST00000539843 SMAD3P84022 425 aaKnown RBP18■□□□□ 0.47
UBE3B-211ENST00000539843 CCDC178Q5BJE1 867 aa18■□□□□ 0.47
UBE3B-211ENST00000539843 AKNAD1Q5T1N1 836 aa18■□□□□ 0.47
UBE3B-211ENST00000539843 SYDE2Q5VT97 1194 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms