RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 KAT2BQ92831 832 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 SECISBP2LQ93073 1101 aaKnown RBP19.67■□□□□ 0.74
RAB40C-205ENST00000539661 LACRTQ9GZZ8 138 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 NHEJ1Q9H9Q4 299 aaPredicted RBP19.67■□□□□ 0.74
RAB40C-205ENST00000539661 MYL1P05976 194 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 TNFRSF8P28908 595 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 LONP1P36776 959 aaKnown RBP19.67■□□□□ 0.74
RAB40C-205ENST00000539661 VAV2P52735 878 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 C2orf54Q08AI8 447 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 IQCDQ96DY2 449 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 ANAPC4Q9UJX5 808 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 GDAQ9Y2T3 454 aa19.67■□□□□ 0.74
RAB40C-205ENST00000539661 MROH5Q6ZUA9 1318 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 ZNF185O15231 689 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 PRKAB2O43741 272 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 CLSTN1O94985 981 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 CALM1P0DP23 149 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 CALM2P0DP24 149 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 CALM3P0DP25 149 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 GSCP56915 257 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-205ENST00000539661 PPARAQ07869 468 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 NKX1-1Q15270 411 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-205ENST00000539661 NPY5RQ15761 445 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 CREG2Q8IUH2 290 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 ANKRD18AQ8IVF6 992 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 EXOC1Q9NV70 894 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 PLCH1Q4KWH8 1693 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 LRP5O75197 1615 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 CNPY4Q8N129 248 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 LCORLQ8N3X6 602 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 CAVIN3Q969G5 261 aa19.66■□□□□ 0.74
RAB40C-205ENST00000539661 V9GY48 417 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-205ENST00000539661 RCCD1A6NED2 376 aa19.65■□□□□ 0.74
RAB40C-205ENST00000539661 HNRNPH1P31943 449 aaKnown RBP19.65■□□□□ 0.74
RAB40C-205ENST00000539661 FIGNQ5HY92 759 aa19.65■□□□□ 0.74
RAB40C-205ENST00000539661 GIGYF2Q6Y7W6 1299 aaKnown RBP19.65■□□□□ 0.74
RAB40C-205ENST00000539661 CATIPQ7Z7H3 387 aa19.65■□□□□ 0.74
RAB40C-205ENST00000539661 TFR2Q9UP52 801 aa19.65■□□□□ 0.74
RAB40C-205ENST00000539661 A0A1W2PQJ5 194 aa19.65■□□□□ 0.74
RAB40C-205ENST00000539661 PRDM1O75626 825 aa19.65■□□□□ 0.74
RAB40C-205ENST00000539661 NNTQ13423 1086 aa19.65■□□□□ 0.74
RAB40C-205ENST00000539661 ZCRB1Q8TBF4 217 aaKnown RBP19.65■□□□□ 0.74
RAB40C-205ENST00000539661 PSMA7O14818 248 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 TACC1O75410 805 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 SLC5A1P13866 664 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 SKIDA1Q1XH10 827 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 RUFY1Q96T51 708 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 NUTM2BA6NNL0 878 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-205ENST00000539661 NUTM2EB1AL46 878 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-205ENST00000539661 ZEB2O60315 1214 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 USO1O60763 962 aaKnown RBP19.64■□□□□ 0.73
RAB40C-205ENST00000539661 TRIM21P19474 475 aaKnown RBP19.64■□□□□ 0.73
RAB40C-205ENST00000539661 EVA1CP58658 441 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 RASGRF1Q13972 1273 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 NLRP10Q86W26 655 aa19.64■□□□□ 0.73
RAB40C-205ENST00000539661 TRIM49BA6NDI0 452 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 PES1O00541 588 aaKnown RBP19.63■□□□□ 0.73
RAB40C-205ENST00000539661 HSF2BPO75031 334 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 TCP1P17987 556 aaKnown RBP19.63■□□□□ 0.73
RAB40C-205ENST00000539661 STAT6P42226 847 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 APBA1Q02410 837 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 IL17AQ16552 155 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-205ENST00000539661 PRPF38AQ8NAV1 312 aaKnown RBP19.63■□□□□ 0.73
RAB40C-205ENST00000539661 SPATA4Q8NEY3 305 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 TRIM47Q96LD4 638 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 ZSCAN10Q96SZ4 725 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-205ENST00000539661 STRCQ7RTU9 1775 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 SPA17Q15506 151 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 RPAINQ86UA6 219 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 PAGR1Q9BTK6 254 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 LRRC1Q9BTT6 524 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 AGPAT5Q9NUQ2 364 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 MAPK8IP1Q9UQF2 711 aa19.63■□□□□ 0.73
RAB40C-205ENST00000539661 DDAH1O94760 285 aa19.62■□□□□ 0.73
RAB40C-205ENST00000539661 ENAHQ8N8S7 591 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-205ENST00000539661 DHTKD1Q96HY7 919 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-205ENST00000539661 TUBGCP2Q9BSJ2 902 aa19.62■□□□□ 0.73
RAB40C-205ENST00000539661 DLEC1Q9Y238 1755 aa19.62■□□□□ 0.73
RAB40C-205ENST00000539661 PLEKHA8P1O95397 391 aa19.62■□□□□ 0.73
RAB40C-205ENST00000539661 GLE1Q53GS7 698 aaKnown RBP19.62■□□□□ 0.73
RAB40C-205ENST00000539661 TTI2Q6NXR4 508 aa19.62■□□□□ 0.73
RAB40C-205ENST00000539661 TMTC3Q6ZXV5 915 aa19.62■□□□□ 0.73
RAB40C-205ENST00000539661 FAM114A1Q8IWE2 563 aa19.62■□□□□ 0.73
RAB40C-205ENST00000539661 GIMAP8Q8ND71 665 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-205ENST00000539661 STIM2Q9P246 746 aa19.62■□□□□ 0.73
RAB40C-205ENST00000539661 DMGDHQ9UI17 866 aaKnown RBP19.62■□□□□ 0.73
RAB40C-205ENST00000539661 EP400Q96L91 3159 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 A0A0G2JS52 829 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 MACROD2A1Z1Q3 448 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 B4DLN1 442 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 IRS4O14654 1257 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-205ENST00000539661 RHOBTB3O94955 611 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
RAB40C-205ENST00000539661 EMC10Q5UCC4 262 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 SYNE4Q8N205 404 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 RRP36Q96EU6 259 aaKnown RBP19.61■□□□□ 0.73
RAB40C-205ENST00000539661 DISC1Q9NRI5 854 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 HYOU1Q9Y4L1 999 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 RASSF10A6NK89 507 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms