RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 VPS54Q9P1Q0 977 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 SPTBN5Q9NRC6 3674 aaKnown RBP10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 VCANP13611 3396 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 MYCP01106 439 aaPredicted RBP10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 MCM4P33991 863 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 SNAP25P60880 206 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 PFKFB3Q16875 520 aaPredicted RBP10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 TYW1BQ6NUM6 668 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 CLEC17AQ6ZS10 378 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 DEFB123Q8N688 67 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 DCAF4Q8WV16 495 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 GPKOWQ92917 476 aaPredicted RBP eCLIP10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 SPZ1Q9BXG8 430 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 ARHGEF10LQ9HCE6 1279 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 PARP14Q460N5 1801 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 PTPRFP10586 1907 aa10.6□□□□□ -0.71
RTN4IP1-204ENST00000539449 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 IGF2BP3O00425 579 aaKnown RBP eCLIP10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 SCG2P13521 617 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 PTPRAP18433 802 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 SMARCA1P28370 1054 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 SLC1A4P43007 532 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 INHBEP58166 350 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 AKAP17AQ02040 695 aaKnown RBP10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 DNM1Q05193 864 aaKnown RBP10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 NPY5RQ15761 445 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 PPP4R3BQ5MIZ7 849 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 NOL9Q5SY16 702 aaKnown RBP10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 WWC2Q6AWC2 1192 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 MCTP1Q6DN14 999 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 HOMER1Q86YM7 354 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 ADGRF4Q8IZF3 695 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 HOOK2Q96ED9 719 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 LZTS2Q9BRK4 669 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 VCPKMTQ9H867 229 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 CNPY2Q9Y2B0 182 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 PTCH2Q9Y6C5 1203 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 SNCAIPQ9Y6H5 919 aa10.59□□□□□ -0.71
RTN4IP1-204ENST00000539449 RLFQ13129 1914 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 TMEM232C9JQI7 657 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 PPP1R11O60927 126 aaPredicted RBP10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 BMP3P12645 472 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 TAL1P17542 331 aaPredicted RBP10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 SP3Q02447 781 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 SPP2Q13103 211 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 VGLL4Q14135 290 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 FAM83BQ5T0W9 1011 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 Q7L0L9 218 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 WASF1Q92558 559 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 MTMR8Q96EF0 704 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 GMCL1Q96IK5 515 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 CLMNQ96JQ2 1002 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 PHF20Q9BVI0 1012 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 EMILIN3Q9NT22 766 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 FBXO28Q9NVF7 368 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 TFIP11Q9UBB9 837 aaKnown RBP10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 NR2E3Q9Y5X4 410 aa10.58□□□□□ -0.72
RTN4IP1-204ENST00000539449 FAM205CA6NFA0 338 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 BTBD18B2RXH4 712 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 STXBP3O00186 592 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 MMP1P03956 469 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 COL9A1P20849 921 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 NF2P35240 595 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 NR5A1Q13285 461 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 CRHR2Q13324 411 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 NBR1Q14596 966 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 EARS2Q5JPH6 523 aaKnown RBP10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 GPATCH4Q5T3I0 446 aaKnown RBP10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 COA7Q96BR5 231 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 RRP36Q96EU6 259 aaKnown RBP10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 FEZ1Q99689 392 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 HTATIP2Q9BUP3 242 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 WDR18Q9BV38 432 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 FTOQ9C0B1 505 aaKnown RBP eCLIP10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 KIAA1683Q9H0B3 1180 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 GOPCQ9HD26 462 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 SYNPO2Q9UMS6 1093 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 ZHX2Q9Y6X8 837 aa10.57□□□□□ -0.72
RTN4IP1-204ENST00000539449 COL11A1P12107 1806 aaPredicted RBP10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 TRIM75PA6NK02 468 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 HAX1O00165 279 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 PDIA4P13667 645 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms