RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 C7orf25Q9BPX7 421 aa7.83□□□□□ -1.16
PROM1-219ENST00000539194 A0A1W2PQJ5 194 aa7.83□□□□□ -1.16
PROM1-219ENST00000539194 NRDCO43847 1150 aa7.83□□□□□ -1.16
PROM1-219ENST00000539194 PARP1P09874 1014 aaKnown RBP7.83□□□□□ -1.16
PROM1-219ENST00000539194 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
PROM1-219ENST00000539194 SNHG28P0DPA3 235 aa7.83□□□□□ -1.16
PROM1-219ENST00000539194 EEF1GP26641 437 aaKnown RBP7.83□□□□□ -1.16
PROM1-219ENST00000539194 RPS8P62241 208 aaKnown RBP7.83□□□□□ -1.16
PROM1-219ENST00000539194 KARSQ15046 597 aaKnown RBP7.83□□□□□ -1.16
PROM1-219ENST00000539194 SMARCC1Q92922 1105 aaPredicted RBP7.83□□□□□ -1.16
PROM1-219ENST00000539194 GNL3LQ9NVN8 582 aaKnown RBP7.83□□□□□ -1.16
PROM1-219ENST00000539194 ZNF652Q9Y2D9 606 aa7.83□□□□□ -1.16
PROM1-219ENST00000539194 TRIM49BA6NDI0 452 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 COBLO75128 1261 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 AARSP49588 968 aaKnown RBP eCLIP7.82□□□□□ -1.16
PROM1-219ENST00000539194 TUBB4BP68371 445 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 ASTE1Q2TB18 679 aaPredicted RBP7.82□□□□□ -1.16
PROM1-219ENST00000539194 CAVIN4Q5BKX8 364 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 JAKMIP3Q5VZ66 844 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 DPY19L2P1Q6NXN4 242 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 SLC35F6Q8N357 371 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 STAMQ92783 540 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 FAM163AQ96GL9 167 aaPredicted RBP7.82□□□□□ -1.16
PROM1-219ENST00000539194 ACSBG1Q96GR2 724 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 ABCF2Q9UG63 623 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 PP2D1A8MPX8 630 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 NDUFA10O95299 355 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 CLK2P49760 499 aaKnown RBP7.82□□□□□ -1.16
PROM1-219ENST00000539194 CRY2Q49AN0 593 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 TMCO3Q6UWJ1 677 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 CYP26C1Q6V0L0 522 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 C16orf86Q6ZW13 317 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 KIAA0895Q8NCT3 520 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 CERKQ8TCT0 537 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 ERGIC2Q96RQ1 377 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 MAGEF1Q9HAY2 307 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 SIK3Q9Y2K2 1263 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 GAKO14976 1311 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 RPS6KA4O75676 772 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 PRPF6O94906 941 aaKnown RBP7.82□□□□□ -1.16
PROM1-219ENST00000539194 IL1R1P14778 569 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 CALML3P27482 149 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 HIBADHP31937 336 aaKnown RBP7.82□□□□□ -1.16
PROM1-219ENST00000539194 RHBDL3P58872 404 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 CHMP4BP1P59074 171 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 ORC2Q13416 577 aaPredicted RBP7.82□□□□□ -1.16
PROM1-219ENST00000539194 ZC3H3Q8IXZ2 948 aaKnown RBP7.82□□□□□ -1.16
PROM1-219ENST00000539194 SH3RF3Q8TEJ3 882 aaPredicted RBP7.82□□□□□ -1.16
PROM1-219ENST00000539194 CUEDC2Q9H467 287 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 TRIM10Q9UDY6 481 aa7.82□□□□□ -1.16
PROM1-219ENST00000539194 MYH10P35580 1976 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 ESYT2A0FGR8 921 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 SPAG1Q07617 926 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 SMC1AQ14683 1233 aaKnown RBP7.81□□□□□ -1.16
PROM1-219ENST00000539194 WHAMMP3Q1A5X7 153 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 CENPPQ6IPU0 288 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 NOA1Q8NC60 698 aaKnown RBP7.81□□□□□ -1.16
PROM1-219ENST00000539194 PNMA1Q8ND90 353 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 CRNKL1Q9BZJ0 848 aaKnown RBP7.81□□□□□ -1.16
PROM1-219ENST00000539194 TRIM9Q9C026 710 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 ANKRD2Q9GZV1 360 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 RIOX1Q9H6W3 641 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 ZCCHC17Q9NP64 241 aaKnown RBP7.81□□□□□ -1.16
PROM1-219ENST00000539194 BLOC1S4Q9NUP1 217 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 RMND1Q9NWS8 449 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 ABCB11O95342 1321 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 RGPD3A6NKT7 1758 aaPredicted RBP7.81□□□□□ -1.16
PROM1-219ENST00000539194 RGPD4Q7Z3J3 1758 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 NPHP1O15259 732 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 MCM7P33993 719 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 VSNL1P62760 191 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 GABPAQ06546 454 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 TAF3Q5VWG9 929 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 SMIM5Q71RC9 77 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 CEP112Q8N8E3 955 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 CCDC12Q8WUD4 166 aaPredicted RBP7.81□□□□□ -1.16
PROM1-219ENST00000539194 AK8Q96MA6 479 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 LZTFL1Q9NQ48 299 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 CCT6AP40227 531 aaKnown RBP7.81□□□□□ -1.16
PROM1-219ENST00000539194 GPKOWQ92917 476 aaPredicted RBP eCLIP7.81□□□□□ -1.16
PROM1-219ENST00000539194 DHTKD1Q96HY7 919 aaPredicted RBP7.81□□□□□ -1.16
PROM1-219ENST00000539194 TMEM47Q9BQJ4 181 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 SEMA6BQ9H3T3 888 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 SLX4Q8IY92 1834 aa7.81□□□□□ -1.16
PROM1-219ENST00000539194 GPR75-ASB3A0A0A6YYF3 556 aa7.8□□□□□ -1.16
PROM1-219ENST00000539194 BHMG1C9JSJ3 638 aaPredicted RBP7.8□□□□□ -1.16
PROM1-219ENST00000539194 ZBTB48P10074 688 aaPredicted RBP7.8□□□□□ -1.16
PROM1-219ENST00000539194 CDK11BP21127 795 aaKnown RBP7.8□□□□□ -1.16
PROM1-219ENST00000539194 ZCWPW2Q504Y3 356 aa7.8□□□□□ -1.16
PROM1-219ENST00000539194 CTCFLQ8NI51 663 aaPredicted RBP7.8□□□□□ -1.16
PROM1-219ENST00000539194 RASGRP4Q8TDF6 673 aa7.8□□□□□ -1.16
PROM1-219ENST00000539194 MTMR8Q96EF0 704 aa7.8□□□□□ -1.16
PROM1-219ENST00000539194 DYNLL2Q96FJ2 89 aa7.8□□□□□ -1.16
PROM1-219ENST00000539194 KLRG2A4D1S0 409 aaPredicted RBP7.8□□□□□ -1.16
PROM1-219ENST00000539194 USP17L3A6NCW0 530 aa7.8□□□□□ -1.16
PROM1-219ENST00000539194 USP17L4A6NCW7 530 aa7.8□□□□□ -1.16
PROM1-219ENST00000539194 LRRIQ3A6PVS8 624 aaPredicted RBP7.8□□□□□ -1.16
PROM1-219ENST00000539194 EIF3CLB5ME19 914 aaKnown RBP7.8□□□□□ -1.16
PROM1-219ENST00000539194 SYF2O95926 243 aaKnown RBP7.8□□□□□ -1.16
PROM1-219ENST00000539194 OAS2P29728 719 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms