RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.19■■□□□ 1.3
DDX55-205ENST00000538744 CNTNAP1P78357 1384 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 SMTNL1A8MU46 457 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 ZBTB5O15062 677 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 SLC1A4P43007 532 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 NT5DC1Q5TFE4 455 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 ISM2Q6H9L7 571 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 GMCL1P1Q8NEA9 526 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.19■■□□□ 1.3
DDX55-205ENST00000538744 RAD21O60216 631 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 GH2P01242 217 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 TPM3P06753 285 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 PRR29P0C7W0 189 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 SLC16A2P36021 539 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 PRPHP41219 470 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 TPM4P67936 248 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 ORC2Q13416 577 aaPredicted RBP23.18■■□□□ 1.3
DDX55-205ENST00000538744 DTHD1Q6ZMT9 781 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 NEK8Q86SG6 692 aa23.18■■□□□ 1.3
DDX55-205ENST00000538744 PPP1R1BQ9UD71 204 aaPredicted RBP23.18■■□□□ 1.3
DDX55-205ENST00000538744 USP17L10C9JJH3 530 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 IKBKBO14920 756 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 MYO1BO43795 1136 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 CDC25BP30305 580 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 TXLNAP40222 546 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 TRIML1Q8N9V2 468 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 VEZTQ9HBM0 779 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 BIN2Q9UBW5 565 aaPredicted RBP23.17■■□□□ 1.3
DDX55-205ENST00000538744 MAN1B1Q9UKM7 699 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 SYNPO2Q9UMS6 1093 aa23.17■■□□□ 1.3
DDX55-205ENST00000538744 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.17■■□□□ 1.3
DDX55-205ENST00000538744 SMC2O95347 1197 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 SARSP49591 514 aaKnown RBP23.16■■□□□ 1.3
DDX55-205ENST00000538744 R3HDM1Q15032 1099 aaKnown RBP23.16■■□□□ 1.3
DDX55-205ENST00000538744 JAKMIP3Q5VZ66 844 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 GRAMD1CQ8IYS0 662 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 IQUBQ8NA54 791 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 SPC24Q8NBT2 197 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 ZBED3Q96IU2 234 aaPredicted RBP23.16■■□□□ 1.3
DDX55-205ENST00000538744 RIC8AQ9NPQ8 531 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 CD2APQ9Y5K6 639 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 F5H6K3 240 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 NFKBIEO00221 500 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 PPP1R11O60927 126 aaPredicted RBP23.16■■□□□ 1.3
DDX55-205ENST00000538744 KLRC3Q07444 240 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 RRP1BQ14684 758 aaKnown RBP23.16■■□□□ 1.3
DDX55-205ENST00000538744 TNIP1Q15025 636 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 LETM2Q2VYF4 491 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 SH3RF1Q7Z6J0 888 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 FAM83AQ86UY5 434 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 TBCKQ8TEA7 893 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 MRFAP1L1Q96HT8 127 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 GMCL1Q96IK5 515 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 TMEM60Q9H2L4 133 aa23.16■■□□□ 1.3
DDX55-205ENST00000538744 CCNT1O60563 726 aaKnown RBP23.15■■□□□ 1.3
DDX55-205ENST00000538744 MMP14P50281 582 aa23.15■■□□□ 1.3
DDX55-205ENST00000538744 JAG1P78504 1218 aa23.15■■□□□ 1.3
DDX55-205ENST00000538744 DRC7Q8IY82 874 aa23.15■■□□□ 1.3
DDX55-205ENST00000538744 SPATA20Q8TB22 786 aa23.15■■□□□ 1.3
DDX55-205ENST00000538744 PAGE5Q96GU1 130 aa23.15■■□□□ 1.3
DDX55-205ENST00000538744 TMEM260Q9NX78 707 aa23.15■■□□□ 1.3
DDX55-205ENST00000538744 E2F4Q16254 413 aa23.14■■□□□ 1.3
DDX55-205ENST00000538744 CUL5Q93034 780 aa23.14■■□□□ 1.3
DDX55-205ENST00000538744 DACH1Q9UI36 760 aa23.14■■□□□ 1.3
DDX55-205ENST00000538744 NEMFO60524 1076 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 NDUFB10O96000 172 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 OR52Z1P0C646 297 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 MORC3Q14149 939 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 NCAPHQ15003 741 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 SGIP1Q9BQI5 828 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 ZNF500O60304 480 aaPredicted RBP23.13■■□□□ 1.29
DDX55-205ENST00000538744 TBC1D12O60347 775 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 AFMP43652 599 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 MRPL12P52815 198 aaKnown RBP23.13■■□□□ 1.29
DDX55-205ENST00000538744 MYL5Q02045 173 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 QRICH1Q2TAL8 776 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 MLKLQ8NB16 471 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 GLT8D2Q9H1C3 349 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 ARHGEF10LQ9HCE6 1279 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 MYOZ2Q9NPC6 264 aa23.13■■□□□ 1.29
DDX55-205ENST00000538744 LTBP3Q9NS15 1303 aa23.12■■□□□ 1.29
DDX55-205ENST00000538744 BMP6P22004 513 aa23.12■■□□□ 1.29
DDX55-205ENST00000538744 BCS1LQ9Y276 419 aa23.12■■□□□ 1.29
DDX55-205ENST00000538744 WNT10BO00744 389 aa23.11■■□□□ 1.29
DDX55-205ENST00000538744 RPS12P25398 132 aaKnown RBP23.11■■□□□ 1.29
DDX55-205ENST00000538744 CDC37Q16543 378 aaPredicted RBP23.11■■□□□ 1.29
DDX55-205ENST00000538744 PDXDC2PQ6P474 469 aa23.11■■□□□ 1.29
DDX55-205ENST00000538744 TMEM39BQ9GZU3 492 aa23.11■■□□□ 1.29
DDX55-205ENST00000538744 BMP3P12645 472 aa23.11■■□□□ 1.29
DDX55-205ENST00000538744 CLK2P49760 499 aaKnown RBP23.11■■□□□ 1.29
DDX55-205ENST00000538744 DPYDQ12882 1025 aa23.11■■□□□ 1.29
DDX55-205ENST00000538744 AK8Q96MA6 479 aa23.11■■□□□ 1.29
DDX55-205ENST00000538744 TTC12Q9H892 705 aaPredicted RBP23.11■■□□□ 1.29
DDX55-205ENST00000538744 PSTPIP2Q9H939 334 aa23.11■■□□□ 1.29
DDX55-205ENST00000538744 ZBTB21Q9ULJ3 1066 aa23.11■■□□□ 1.29
DDX55-205ENST00000538744 UBA7P41226 1012 aa23.1■■□□□ 1.29
DDX55-205ENST00000538744 TNNI2P48788 182 aa23.1■■□□□ 1.29
DDX55-205ENST00000538744 ZNF280AP59817 542 aaPredicted RBP23.1■■□□□ 1.29
DDX55-205ENST00000538744 NBPF9Q3BBW0 867 aa23.1■■□□□ 1.29
DDX55-205ENST00000538744 ZNF830Q96NB3 372 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms