RNA–Protein interactions for RNA: ENST00000538315.5

MRPS35-203, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 2 BASIC

Gene MRPS35, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-203ENST00000538315 SNRNP48Q6IEG0 339 aaKnown RBP13.1□□□□□ -0.31
MRPS35-203ENST00000538315 TMTC3Q6ZXV5 915 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 SRBD1Q8N5C6 995 aaKnown RBP13.1□□□□□ -0.31
MRPS35-203ENST00000538315 ZNF296Q8WUU4 475 aaPredicted RBP13.1□□□□□ -0.31
MRPS35-203ENST00000538315 RANBP17Q9H2T7 1088 aaKnown RBP13.1□□□□□ -0.31
MRPS35-203ENST00000538315 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 CWC22Q9HCG8 908 aaKnown RBP13.1□□□□□ -0.31
MRPS35-203ENST00000538315 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 NID2Q14112 1375 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 CPLX1O14810 134 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 CYTH3O43739 400 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
MRPS35-203ENST00000538315 KIF22Q14807 665 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 REPS2Q8NFH8 660 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 SPZ1Q9BXG8 430 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 TEX13BQ9BXU2 312 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 RIOX1Q9H6W3 641 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 FAM217BQ9NTX9 383 aaPredicted RBP13.1□□□□□ -0.31
MRPS35-203ENST00000538315 ZNF214Q9UL59 606 aaPredicted RBP13.1□□□□□ -0.31
MRPS35-203ENST00000538315 LIMCH1Q9UPQ0 1083 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 ZSWIM8A7E2V4 1837 aa13.1□□□□□ -0.31
MRPS35-203ENST00000538315 LARGE1O95461 756 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 HSPA8P11142 646 aaKnown RBP13.09□□□□□ -0.31
MRPS35-203ENST00000538315 LBX1P52954 281 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 OAZ1P54368 228 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
MRPS35-203ENST00000538315 ME3Q16798 604 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 SLC35G1Q2M3R5 365 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 QRICH1Q2TAL8 776 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 NOM1Q5C9Z4 860 aaKnown RBP13.09□□□□□ -0.31
MRPS35-203ENST00000538315 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 RRP36Q96EU6 259 aaKnown RBP13.09□□□□□ -0.31
MRPS35-203ENST00000538315 AGBL1Q96MI9 1066 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 PIGSQ96S52 555 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
MRPS35-203ENST00000538315 PORCNQ9H237 461 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 HOMER2Q9NSB8 354 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
MRPS35-203ENST00000538315 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
MRPS35-203ENST00000538315 hCG_1642624A0A1W2PR95 340 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ZBTB5O15062 677 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 PFKFB2O60825 505 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ICAM1P05362 532 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ALAS1P13196 640 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 SMARCA1P28370 1054 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 SCRN1Q12765 414 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 USH1GQ495M9 461 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 CPLX2Q6PUV4 134 aaKnown RBP13.08□□□□□ -0.32
MRPS35-203ENST00000538315 NECAB1Q8N987 351 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 CD99L2Q8TCZ2 262 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 EFCC1Q9HA90 598 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ZNF536O15090 1300 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 CNTNAP5Q8WYK1 1306 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ATP2A1O14983 1001 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
MRPS35-203ENST00000538315 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
MRPS35-203ENST00000538315 SLC25A27O95847 323 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 TAL1P17542 331 aaPredicted RBP13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ERCC3P19447 782 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 MAPK4P31152 587 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 PSMC4P43686 418 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 RIOX2Q8IUF8 465 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ZSCAN31Q96LW9 406 aaPredicted RBP13.08□□□□□ -0.32
MRPS35-203ENST00000538315 ARHGAP39Q9C0H5 1083 aa13.08□□□□□ -0.32
MRPS35-203ENST00000538315 PLXNB2O15031 1838 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 ZNFX1Q9P2E3 1918 aaKnown RBP13.07□□□□□ -0.32
MRPS35-203ENST00000538315 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 TNPO2O14787 897 aaKnown RBP13.07□□□□□ -0.32
MRPS35-203ENST00000538315 COPB2P35606 906 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 MCM2P49736 904 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 FCGRTP55899 365 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 AKAP17AQ02040 695 aaKnown RBP13.07□□□□□ -0.32
MRPS35-203ENST00000538315 PHKBQ93100 1093 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 GTF3C6Q969F1 213 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 MTMR8Q96EF0 704 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 AMNQ9BXJ7 453 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
MRPS35-203ENST00000538315 PNMA2Q9UL42 364 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 IVNS1ABPQ9Y6Y0 642 aa13.07□□□□□ -0.32
MRPS35-203ENST00000538315 IFNAR1P17181 557 aa13.06□□□□□ -0.32
MRPS35-203ENST00000538315 CCDC83Q8IWF9 413 aa13.06□□□□□ -0.32
MRPS35-203ENST00000538315 SHCBP1Q8NEM2 672 aa13.06□□□□□ -0.32
MRPS35-203ENST00000538315 TRERF1Q96PN7 1200 aa13.06□□□□□ -0.32
MRPS35-203ENST00000538315 SLC26A6Q9BXS9 759 aa13.06□□□□□ -0.32
MRPS35-203ENST00000538315 MROH8Q9H579 483 aa13.06□□□□□ -0.32
MRPS35-203ENST00000538315 RNF146Q9NTX7 359 aa13.06□□□□□ -0.32
MRPS35-203ENST00000538315 V9GY48 417 aaPredicted RBP13.06□□□□□ -0.32
MRPS35-203ENST00000538315 CDKL5O76039 1030 aa13.05□□□□□ -0.32
MRPS35-203ENST00000538315 CTGFP29279 349 aa13.05□□□□□ -0.32
MRPS35-203ENST00000538315 SSRP1Q08945 709 aaKnown RBP13.05□□□□□ -0.32
MRPS35-203ENST00000538315 FUT2Q10981 343 aa13.05□□□□□ -0.32
MRPS35-203ENST00000538315 ARHGEF6Q15052 776 aa13.05□□□□□ -0.32
MRPS35-203ENST00000538315 NTRK3Q16288 839 aa13.05□□□□□ -0.32
MRPS35-203ENST00000538315 TKFCQ3LXA3 575 aa13.05□□□□□ -0.32
MRPS35-203ENST00000538315 GPR142Q7Z601 462 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms