RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 ZNF654Q8IZM8 581 aa12.88□□□□□ -0.35
AC087235.1-201ENST00000538297 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
AC087235.1-201ENST00000538297 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
AC087235.1-201ENST00000538297 ZNF274Q96GC6 653 aaPredicted RBP12.88□□□□□ -0.35
AC087235.1-201ENST00000538297 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
AC087235.1-201ENST00000538297 MAF1Q9H063 256 aa12.88□□□□□ -0.35
AC087235.1-201ENST00000538297 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
AC087235.1-201ENST00000538297 RABGAP1Q9Y3P9 1069 aa12.88□□□□□ -0.35
AC087235.1-201ENST00000538297 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 ATP2A1O14983 1001 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 TRPA1O75762 1119 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 COPB2P35606 906 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 MCM2P49736 904 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 NEK4P51957 841 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 OAZ1P54368 228 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 HERVK_113P62684 666 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 CCNA1P78396 465 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 FAM83BQ5T0W9 1011 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 APOA5Q6Q788 366 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 Q6ZUG5 572 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 FANCBQ8NB91 859 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 NKX2-3Q8TAU0 364 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 PTCD2Q8WV60 388 aaKnown RBP12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 MORF4L1Q9UBU8 362 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
AC087235.1-201ENST00000538297 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 ZBTB43O43298 467 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 ZBED4O75132 1171 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 GNRH1P01148 92 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 CRHR2Q13324 411 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 GRM4Q14833 912 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 FAM110CQ1W6H9 321 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 KIAA1755Q5JYT7 1200 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 P2RX7Q99572 595 aaKnown RBP12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 RYDENQ9NUL5 291 aaKnown RBP12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 CTDP1Q9Y5B0 961 aaPredicted RBP12.86□□□□□ -0.35
AC087235.1-201ENST00000538297 KLRF2D3W0D1 207 aa12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 VWA5AO00534 786 aa12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 IKQ13123 557 aaPredicted RBP12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 GPRC5AQ8NFJ5 357 aa12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 BRF1Q92994 677 aa12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 KIF2CQ99661 725 aa12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 UPF3BQ9BZI7 483 aaKnown RBP12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
AC087235.1-201ENST00000538297 NID2Q14112 1375 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 KLF18A0A0U1RQI7 1052 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 SPDYE16A6NNV3 312 aaPredicted RBP12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 SLC25A27O95847 323 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 BCRP11274 1271 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 KIF22Q14807 665 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 SYDE2Q5VT97 1194 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 KCTD1Q719H9 257 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 SPZ1Q9BXG8 430 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 MAD2L2Q9UI95 211 aa12.84□□□□□ -0.35
AC087235.1-201ENST00000538297 ADGRA2Q96PE1 1338 aa12.83□□□□□ -0.35
AC087235.1-201ENST00000538297 GPR25O00155 361 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 STRNO43815 780 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 CYP2C8P10632 490 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 PDIA3P30101 505 aaKnown RBP12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 CTCFP49711 727 aaPredicted RBP12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 SP3Q02447 781 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 TKFCQ3LXA3 575 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 NUP133Q8WUM0 1156 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 KIFC2Q96AC6 838 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 NUP88Q99567 741 aaPredicted RBP12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 TEX13BQ9BXU2 312 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 LRRC2Q9BYS8 371 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 MROH8Q9H579 483 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 RIOX1Q9H6W3 641 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 RBPJLQ9UBG7 517 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 PRR12Q9ULL5 1215 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 CEP350Q5VT06 3117 aa12.83□□□□□ -0.36
AC087235.1-201ENST00000538297 FKTNO75072 461 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 PPP1R37O75864 691 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 CPA1P15085 419 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 MAPK4P31152 587 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 ERVK-24P63145 666 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 DGKZQ13574 1117 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 RTN1Q16799 776 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 CCAR1Q8IX12 1150 aaKnown RBP12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 FAM177A1Q8N128 213 aaPredicted RBP12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 ERO1AQ96HE7 468 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 TCEANC2Q96MN5 208 aa12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 RANBP17Q9H2T7 1088 aaKnown RBP12.82□□□□□ -0.36
AC087235.1-201ENST00000538297 SENP2Q9HC62 589 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms