RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 PTPRSQ13332 1948 aa11.95□□□□□ -0.5
PRKAB1-204ENST00000538271 ASNSP08243 561 aa11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 CST5P28325 142 aaPredicted RBP11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 TMPOP42166 694 aaKnown RBP11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 JAG1P78504 1218 aa11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 COL19A1Q14993 1142 aa11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 LMBR1LQ6UX01 489 aa11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 CHAMP1Q96JM3 812 aa11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 MOV10L1Q9BXT6 1211 aaKnown RBP11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 MYO7AQ13402 2215 aa11.94□□□□□ -0.5
PRKAB1-204ENST00000538271 ASPMQ8IZT6 3477 aa11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 STXBP3O00186 592 aa11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 LDHBP07195 334 aaKnown RBP11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 ACTN1P12814 892 aa11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 ERVK-21P61565 698 aa11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 CATSPERGQ6ZRH7 1159 aa11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 DEFB128Q7Z7B8 93 aa11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 PCSK9Q8NBP7 692 aaKnown RBP11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
PRKAB1-204ENST00000538271 MROH5Q6ZUA9 1318 aa11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 ELL2O00472 640 aaPredicted RBP11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 GPR37O15354 613 aa11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 MBTPS2O43462 519 aa11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 ERCC3P19447 782 aa11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 TGS1Q96RS0 853 aaKnown RBP11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 TINF2Q9BSI4 451 aa11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 COL11A1P12107 1806 aaPredicted RBP11.92□□□□□ -0.5
PRKAB1-204ENST00000538271 PDGFBP01127 241 aaPredicted RBP11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 C6orf222P0C671 652 aaPredicted RBP11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 LTBRP36941 435 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 SHROOM1Q2M3G4 852 aaPredicted RBP11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 ABRAQ8N0Z2 381 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 SLC43A3Q8NBI5 491 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 SHCBP1Q8NEM2 672 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 TET1Q8NFU7 2136 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 MRPL38Q96DV4 380 aaKnown RBP11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 CDCA7LQ96GN5 454 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 C12orf42Q96LP6 360 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 CLDND1Q9NY35 253 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 PLA2G2EQ9NZK7 142 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 OTOGLQ3ZCN5 2332 aa11.91□□□□□ -0.5
PRKAB1-204ENST00000538271 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 A0A1B0GUL7 405 aa11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 CLUL1Q15846 466 aa11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 TIGD5Q53EQ6 642 aa11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 TCEAL5Q5H9L2 206 aa11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 TRPV6Q9H1D0 765 aa11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 CTNNA3Q9UI47 895 aa11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 HERC5Q9UII4 1024 aaKnown RBP11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 ASH1LQ9NR48 2969 aaKnown RBP11.9□□□□□ -0.5
PRKAB1-204ENST00000538271 NAV2Q8IVL1 2488 aa11.89□□□□□ -0.51
PRKAB1-204ENST00000538271 CDK5RAP2Q96SN8 1893 aa11.89□□□□□ -0.51
PRKAB1-204ENST00000538271 DUSP11O75319 330 aaKnown RBP11.89□□□□□ -0.51
PRKAB1-204ENST00000538271 RSPO4Q2I0M5 234 aaPredicted RBP11.89□□□□□ -0.51
PRKAB1-204ENST00000538271 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
PRKAB1-204ENST00000538271 BANK1Q8NDB2 785 aa11.89□□□□□ -0.51
PRKAB1-204ENST00000538271 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
PRKAB1-204ENST00000538271 FAM184BQ9ULE4 1060 aa11.89□□□□□ -0.51
PRKAB1-204ENST00000538271 KIF16BQ96L93 1317 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 SOBPA7XYQ1 873 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 LOC730098B7Z3J9 87 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 B4GALT4O60513 344 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 BTDP43251 543 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 NEUROD2Q15784 382 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 ZYXQ15942 572 aaKnown RBP11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 PTPROQ16827 1216 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 GNASQ5JWF2 1037 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 RPAINQ86UA6 219 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 VGLL2Q8N8G2 317 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 TMEM105Q8N8V8 129 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 RIPOR3Q96MK2 946 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 CNPY2Q9Y2B0 182 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
PRKAB1-204ENST00000538271 FRYLO94915 3013 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 GCN1Q92616 2671 aaKnown RBP11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 PDE8BO95263 885 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 GDF11O95390 407 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 VCAM1P19320 739 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 RHBDL3P58872 404 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 DLX2Q07687 328 aaPredicted RBP11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 CBX2Q14781 532 aaPredicted RBP11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 METTL24Q5JXM2 366 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 KIAA0319Q5VV43 1072 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 TMCO2Q7Z6W1 182 aaPredicted RBP11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 KCNG4Q8TDN1 519 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 ZBED2Q9BTP6 218 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 UPF3AQ9H1J1 476 aaKnown RBP11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 MROH8Q9H579 483 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 SPC25Q9HBM1 224 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 ZBTB21Q9ULJ3 1066 aa11.87□□□□□ -0.51
PRKAB1-204ENST00000538271 TNKSO95271 1327 aa11.86□□□□□ -0.51
PRKAB1-204ENST00000538271 SALL1Q9NSC2 1324 aa11.86□□□□□ -0.51
PRKAB1-204ENST00000538271 LMNAP02545 664 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms