RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 BCL11AQ9H165 835 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 TMEM39AQ9NV64 488 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 PPP1R1BQ9UD71 204 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 GPN3Q9UHW5 284 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 NIP7Q9Y221 180 aaKnown RBP eCLIP5.41□□□□□ -1.544e-44■■■■■ 26.8
SNHG1-208ENST00000538266 ANKRD36CQ5JPF3 1778 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 ATP10DQ9P241 1426 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 NUP98P52948 1817 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 F6X3S4 739 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 ADAM11O75078 769 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 BCAR3O75815 825 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 ALX3O95076 343 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 CYP11A1P05108 521 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 GPTP24298 496 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 CHRNA4P43681 627 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 NFIXQ14938 502 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 HLFQ16534 295 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 PLA2G4EQ3MJ16 856 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 PARP10Q53GL7 1025 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 ZKSCAN2Q63HK3 967 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 TBC1D9BQ66K14 1250 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 SLC4A10Q6U841 1118 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 PPP1R42Q7Z4L9 355 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 NBPF5PQ86XG9 351 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-208ENST00000538266 CNBD1Q8NA66 436 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 WFDC12Q8WWY7 111 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 DNAAF4Q8WXU2 420 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 ARHGAP45Q92619 1136 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 MYD88Q99836 296 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 METTL22Q9BUU2 404 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-208ENST00000538266 CEP44Q9C0F1 390 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 NYXQ9GZU5 481 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 VTI1BQ9UEU0 232 aa5.4□□□□□ -1.54
SNHG1-208ENST00000538266 NOB1Q9ULX3 412 aaKnown RBP5.4□□□□□ -1.54
SNHG1-208ENST00000538266 ADCY9O60503 1353 aa5.4□□□□□ -1.55
SNHG1-208ENST00000538266 PXDNLA1KZ92 1463 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 AFDNP55196 1824 aaKnown RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 FBXO24O75426 580 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 TRIM27P14373 513 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 HSP90B1P14625 803 aaKnown RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 MAOBP27338 520 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 IREB2P48200 963 aaKnown RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 CCT4P50991 539 aaKnown RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 ST5P78524 1137 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 TCIRG1Q13488 830 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 POU4F3Q15319 338 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 TAF1CQ15572 869 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 ERICH6BQ5W0A0 696 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 ATF7IPQ6VMQ6 1270 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 TPTE2Q6XPS3 522 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 ACAD11Q709F0 780 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 LINS1Q8NG48 757 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 NECAB3Q96P71 396 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 UTP14AQ9BVJ6 771 aaKnown RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 USP26Q9BXU7 913 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 AKTIPQ9H8T0 292 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 CWC25Q9NXE8 425 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 PPM1HQ9ULR3 514 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 TTF2Q9UNY4 1162 aaKnown RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 RNF123Q5XPI4 1314 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 COL24A1Q17RW2 1714 aa5.39□□□□□ -1.55
SNHG1-208ENST00000538266 IBTKQ9P2D0 1353 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-208ENST00000538266 LRP5O75197 1615 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 POLRMTO00411 1230 aaKnown RBP5.38□□□□□ -1.55
SNHG1-208ENST00000538266 ALDH1L1O75891 902 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 WISP1O95388 367 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 SERPINB2P05120 415 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 CTSHP09668 335 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 GATA4P43694 442 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 DDR1Q08345 913 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 ADGRE1Q14246 886 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 CWF19L2Q2TBE0 894 aaKnown RBP5.38□□□□□ -1.55
SNHG1-208ENST00000538266 EXOSC6Q5RKV6 272 aaKnown RBP5.38□□□□□ -1.55
SNHG1-208ENST00000538266 KIAA1211Q6ZU35 1233 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 UBE3BQ7Z3V4 1068 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 NLRP10Q86W26 655 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 ITPRIPQ8IWB1 547 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 ZNF34Q8IZ26 560 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 AGGF1Q8N302 714 aaeCLIP5.38□□□□□ -1.55
SNHG1-208ENST00000538266 CCDC191Q8NCU4 936 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 UBASH3BQ8TF42 649 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 CORO1BQ9BR76 489 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 C9orf78Q9NZ63 289 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-208ENST00000538266 TRMT112Q9UI30 125 aaKnown RBP5.38□□□□□ -1.55
SNHG1-208ENST00000538266 UBN2Q6ZU65 1347 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 SH3TC1Q8TE82 1336 aa5.38□□□□□ -1.55
SNHG1-208ENST00000538266 N4BP2Q86UW6 1770 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-208ENST00000538266 LOC100289279A0A1B0GTE1 492 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 F8W735 103 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-208ENST00000538266 GRM8O00222 908 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 ITGB2P05107 769 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 ARNTP27540 789 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 NOS3P29474 1203 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 TM4SF1P30408 202 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 PDE6BP35913 854 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 AP3B2Q13367 1082 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 GCKRQ14397 625 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 MBTPS1Q14703 1052 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 BEND3Q5T5X7 828 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 MEI1Q5TIA1 1274 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms