RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 USP20Q9Y2K6 914 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 MYH13Q9UKX3 1938 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 TRIOBPQ9H2D6 2365 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 SASH3O75995 380 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 TARSP26639 723 aaKnown RBP6.74□□□□□ -1.33
SNHG1-207ENST00000537965 RBM5P52756 815 aaKnown RBP eCLIP6.74□□□□□ -1.33
SNHG1-207ENST00000537965 SP3Q02447 781 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 CHRNDQ07001 517 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 TBC1D8BQ0IIM8 1120 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 IFIT5Q13325 482 aaKnown RBP6.74□□□□□ -1.33
SNHG1-207ENST00000537965 GCKRQ14397 625 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 TXNRD3Q86VQ6 643 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 RGL4Q8IZJ4 473 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 CMTR1Q8N1G2 835 aaKnown RBP6.74□□□□□ -1.33
SNHG1-207ENST00000537965 LINS1Q8NG48 757 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 MXD3Q9BW11 206 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 PLVAPQ9BX97 442 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 STIM2Q9P246 746 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 PTPN22Q9Y2R2 807 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 KCNMB2Q9Y691 235 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 HTTP42858 3142 aa6.74□□□□□ -1.33
SNHG1-207ENST00000537965 OTOFQ9HC10 1997 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 DOCK3Q8IZD9 2030 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 XYLBO75191 536 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 USP2O75604 605 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-207ENST00000537965 IL1R1P14778 569 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 TNNI2P48788 182 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 KIF22Q14807 665 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 PCSK7Q16549 785 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 CCDC27Q2M243 656 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 CWF19L2Q2TBE0 894 aaKnown RBP6.73□□□□□ -1.33
SNHG1-207ENST00000537965 TWISTNBQ3B726 338 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-207ENST00000537965 CFAP100Q494V2 611 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 TAF7LQ5H9L4 462 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 HABP4Q5JVS0 413 aaKnown RBP6.73□□□□□ -1.33
SNHG1-207ENST00000537965 KRT25Q7Z3Z0 450 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 DNAAF4Q8WXU2 420 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 ARMC5Q96C12 935 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 HOOK2Q96ED9 719 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 R3HDMLQ9H3Y0 253 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 PRKRIP1Q9H875 184 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-207ENST00000537965 VEZTQ9HBM0 779 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 ZFYVE28Q9HCC9 887 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 SEPT3Q9UH03 358 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 MGAMO43451 1857 aa6.73□□□□□ -1.33
SNHG1-207ENST00000537965 WTIPA6NIX2 430 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-207ENST00000537965 SPDYE3A6NKU9 549 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
SNHG1-207ENST00000537965 LILRB5O75023 590 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 RARAP10276 462 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 GTF2A2P52657 109 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 PRMT2P55345 433 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 CRHR2Q13324 411 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 RASA3Q14644 834 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 CCDC57Q2TAC2 916 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 SLC9C1Q4G0N8 1177 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 LDHAL6AQ6ZMR3 332 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 C8orf86Q6ZUL3 223 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 DHX32Q7L7V1 743 aaKnown RBP6.72□□□□□ -1.33
SNHG1-207ENST00000537965 TSPYL6Q8N831 410 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 CD99L2Q8TCZ2 262 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 ZCCHC17Q9NP64 241 aaKnown RBP6.72□□□□□ -1.33
SNHG1-207ENST00000537965 FAM13BQ9NYF5 915 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 CSADQ9Y600 493 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 ARAP2Q8WZ64 1704 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 IL16Q14005 1332 aa6.72□□□□□ -1.33
SNHG1-207ENST00000537965 CLRN2A0PK11 232 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 ZBTB42B2RXF5 422 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 F8W031 263 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-207ENST00000537965 MSTNO14793 375 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 ZBTB39O15060 712 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 TAF5LO75529 589 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 NID1P14543 1247 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 CASP7P55210 303 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 UBE4AQ14139 1066 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 TAF1CQ15572 869 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-207ENST00000537965 SLC4A8Q2Y0W8 1093 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 NBPF12Q5TAG4 269 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-207ENST00000537965 CERS5Q8N5B7 392 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 PIK3R5Q8WYR1 880 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 OPTNQ96CV9 577 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 CLMNQ96JQ2 1002 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 PRMT6Q96LA8 375 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-207ENST00000537965 CNNM1Q9NRU3 951 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 TLR7Q9NYK1 1049 aaKnown RBP6.71□□□□□ -1.34
SNHG1-207ENST00000537965 NAGPAQ9UK23 515 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 FAM205AQ6ZU69 1335 aa6.71□□□□□ -1.34
SNHG1-207ENST00000537965 PLIN1O60240 522 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 CETPP11597 493 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 CAPN2P17655 700 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 EN2P19622 333 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-207ENST00000537965 KLRK1P26718 216 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 HOXD10P28358 340 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 ARID4AP29374 1257 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-207ENST00000537965 HIBADHP31937 336 aaKnown RBP6.7□□□□□ -1.34
SNHG1-207ENST00000537965 ZAP70P43403 619 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 GPLD1P80108 840 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 HDLBPQ00341 1268 aaKnown RBP6.7□□□□□ -1.34
SNHG1-207ENST00000537965 MFSD14BQ5SR56 506 aa6.7□□□□□ -1.34
SNHG1-207ENST00000537965 VPS37DQ86XT2 251 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms