RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 ZBED4O75132 1171 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 FLT3LGP49771 235 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 IRF5Q13568 498 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 WTAPQ15007 396 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 GPATCH4Q5T3I0 446 aaKnown RBP13.37□□□□□ -0.27
SNHG1-206ENST00000537925 TTBK2Q6IQ55 1244 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 PLEKHH3Q7Z736 793 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 TMEM87BQ96K49 555 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 SENP2Q9HC62 589 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 PRR12Q9ULL5 1215 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 BRCA2P51587 3418 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
SNHG1-206ENST00000537925 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
SNHG1-206ENST00000537925 SLC25A27O95847 323 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 ERCC3P19447 782 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 STAT3P40763 770 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 OAZ1P54368 228 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 IKQ13123 557 aaPredicted RBP13.36□□□□□ -0.27
SNHG1-206ENST00000537925 PKP1Q13835 747 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 PLS1Q14651 629 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 TMEM67Q5HYA8 995 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 CCAR1Q8IX12 1150 aaKnown RBP13.36□□□□□ -0.27
SNHG1-206ENST00000537925 USP6NLQ92738 828 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 MROH8Q9H579 483 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 LY9Q9HBG7 655 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 RRAGDQ9NQL2 400 aaPredicted RBP13.36□□□□□ -0.27
SNHG1-206ENST00000537925 LCTP09848 1927 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 SH2B2O14492 632 aaPredicted RBP13.36□□□□□ -0.27
SNHG1-206ENST00000537925 PTPREP23469 700 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 SLC16A2P36021 539 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 LIFRP42702 1097 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
SNHG1-206ENST00000537925 TROAPQ12815 778 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 ASPRV1Q53RT3 343 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 MORN1Q5T089 497 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 SYDE2Q5VT97 1194 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 RAET1EQ8TD07 263 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 SOCS4Q8WXH5 440 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
SNHG1-206ENST00000537925 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
SNHG1-206ENST00000537925 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
SNHG1-206ENST00000537925 MCM3APO60318 1980 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 ZNF536O15090 1300 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 SLC15A5A6NIM6 579 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 STRNO43815 780 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
SNHG1-206ENST00000537925 GOLGA8HP0CJ92 632 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
SNHG1-206ENST00000537925 COPB2P35606 906 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 GRB14Q14449 540 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 ZSCAN23Q3MJ62 389 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
SNHG1-206ENST00000537925 DHX32Q7L7V1 743 aaKnown RBP13.35□□□□□ -0.27
SNHG1-206ENST00000537925 NCAPG2Q86XI2 1143 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 CPXCR1Q8N123 301 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 ARMC5Q96C12 935 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 NUDT12Q9BQG2 462 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 RANBP17Q9H2T7 1088 aaKnown RBP13.35□□□□□ -0.27
SNHG1-206ENST00000537925 RAVER2Q9HCJ3 691 aaKnown RBP13.35□□□□□ -0.27
SNHG1-206ENST00000537925 RIPK3Q9Y572 518 aa13.35□□□□□ -0.27
SNHG1-206ENST00000537925 PALM3A6NDB9 673 aaPredicted RBP13.34□□□□□ -0.27
SNHG1-206ENST00000537925 ADCY3O60266 1144 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 PARP1P09874 1014 aaKnown RBP13.34□□□□□ -0.27
SNHG1-206ENST00000537925 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
SNHG1-206ENST00000537925 GRK4P32298 578 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
SNHG1-206ENST00000537925 MAP2K5Q13163 448 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 GRM4Q14833 912 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 HS1BP3Q53T59 392 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 ABRAQ8N0Z2 381 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 TMEM87AQ8NBN3 555 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 SLAIN1Q8ND83 568 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 ANP32BQ92688 251 aaKnown RBP13.34□□□□□ -0.27
SNHG1-206ENST00000537925 MAP3K14Q99558 947 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 LRRC2Q9BYS8 371 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 CTDP1Q9Y5B0 961 aaPredicted RBP13.34□□□□□ -0.27
SNHG1-206ENST00000537925 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
SNHG1-206ENST00000537925 HOXC6P09630 235 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 SNAP25P60880 206 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNHG1-206ENST00000537925 CATIPQ7Z7H3 387 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 SGMS1Q86VZ5 419 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 ZNF654Q8IZM8 581 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 STAG2Q8N3U4 1231 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 SH3TC2Q8TF17 1288 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 JAKMIP1Q96N16 626 aaKnown RBP13.33□□□□□ -0.28
SNHG1-206ENST00000537925 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 CPVLQ9H3G5 476 aa13.33□□□□□ -0.28
SNHG1-206ENST00000537925 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
SNHG1-206ENST00000537925 ESPNB1AK53 854 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms